RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 DUSP10Q9Y6W6 482 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 MAFGO15525 162 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 ATP8B1O43520 1251 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 ZRANB2O95218 330 aaKnown RBP eCLIP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 MYCLP12524 364 aaPredicted RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 RARRES1P49788 294 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 BMS1Q14692 1282 aaKnown RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 COG2Q14746 738 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 ASIC2Q16515 512 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 TDRD12Q587J7 1177 aaKnown RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 ARHGEF16Q5VV41 709 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 TMCO3Q6UWJ1 677 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 NSMFQ6X4W1 530 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 FAM186BQ8IYM0 893 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 GPC2Q8N158 579 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 GPRASP2Q96D09 838 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 WNK4Q96J92 1243 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 LUC7LQ9NQ29 371 aaKnown RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 LARSQ9P2J5 1176 aaKnown RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 RIPK3Q9Y572 518 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 MYPNQ86TC9 1320 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 SSC5DA1L4H1 1573 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 LCTP09848 1927 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 MACROD2A1Z1Q3 448 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 WDR64B1ANS9 1081 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 UCHL3P15374 230 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 SLC9A1P19634 815 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 CCND2P30279 289 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 HMGCS2P54868 508 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 GFPT1Q06210 699 aaPredicted RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 BAATQ14032 418 aaPredicted RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 RNF10Q8N5U6 811 aaKnown RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 SENP7Q9BQF6 1050 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 PAPPA2Q9BXP8 1791 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 AGPAT3Q9NRZ7 376 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 ZNF214Q9UL59 606 aaPredicted RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 JRKLQ9Y4A0 524 aa17.23■□□□□ 0.35
NR1H3-235ENST00000616973 BZW2Q9Y6E2 419 aaKnown RBP17.23■□□□□ 0.35
NR1H3-235ENST00000616973 ENC1O14682 589 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 PRLRP16471 622 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 PSMC5P62195 406 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 APBA1Q02410 837 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 RAPGEF1Q13905 1077 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 BRD3Q15059 726 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 PPP2R5AQ15172 486 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 SLC18A3Q16572 532 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 DCAF17Q5H9S7 520 aaPredicted RBP17.22■□□□□ 0.35
NR1H3-235ENST00000616973 CATSPERGQ6ZRH7 1159 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 VSIG10LQ86VR7 867 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 RPGRIP1Q96KN7 1286 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 ST6GALNAC4Q9H4F1 302 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 SIX2Q9NPC8 291 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 ANKEF1Q9NU02 776 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 GGA3Q9NZ52 723 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 SAMM50Q9Y512 469 aa17.22■□□□□ 0.35
NR1H3-235ENST00000616973 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 YWHABP31946 246 aaKnown RBP17.21■□□□□ 0.35
NR1H3-235ENST00000616973 CKAP4Q07065 602 aaKnown RBP17.21■□□□□ 0.35
NR1H3-235ENST00000616973 KLHL30Q0D2K2 578 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 SUPT20HL1Q3ZLR7 823 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 TCERG1LQ5VWI1 586 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 SNRNP48Q6IEG0 339 aaKnown RBP17.21■□□□□ 0.35
NR1H3-235ENST00000616973 NLGN2Q8NFZ4 835 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 EPC1Q9H2F5 836 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 TMEM206Q9H813 350 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 ANKZF1Q9H8Y5 726 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 RAB21Q9UL25 225 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 FRMD4BQ9Y2L6 1034 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 DAAM1Q9Y4D1 1078 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 DOCK5Q9H7D0 1870 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 CCDC151A5D8V7 595 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 ATP9AO75110 1047 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 TUBBP07437 444 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 NR3C2P08235 984 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 ACTN1P12814 892 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 PLS3P13797 630 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 ANXA13P27216 316 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 PRKCIP41743 596 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 SH3D19Q5HYK7 790 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 PRAMEF18Q5VWM3 479 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
NR1H3-235ENST00000616973 IRF2BP2Q7Z5L9 587 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 NLRX1Q86UT6 975 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 C12orf56Q8IXR9 622 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 INPP4AQ96PE3 977 aaPredicted RBP17.21■□□□□ 0.35
NR1H3-235ENST00000616973 ALS2CR12Q96Q35 445 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 TMOD4Q9NZQ9 345 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 HDAC6Q9UBN7 1215 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 TCEAL9Q9UHQ7 104 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 AFG3L2Q9Y4W6 797 aa17.21■□□□□ 0.35
NR1H3-235ENST00000616973 ATP8B3O60423 1300 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 TESPA1A2RU30 521 aaPredicted RBP17.2■□□□□ 0.34
NR1H3-235ENST00000616973 CCNE2O96020 404 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 JAM2P57087 298 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 SNRPFP62306 86 aaKnown RBP17.2■□□□□ 0.34
NR1H3-235ENST00000616973 CBX1P83916 185 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 C10orf76Q5T2E6 689 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 CC2D1AQ6P1N0 951 aaPredicted RBP17.2■□□□□ 0.34
NR1H3-235ENST00000616973 KSR1Q8IVT5 923 aa17.2■□□□□ 0.34
NR1H3-235ENST00000616973 FAM133AQ8N9E0 248 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms