RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TLR9Q9NR96 1032 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 TYW1Q9NV66 732 aaKnown RBP20.23■□□□□ 0.83
SMN2-213ENST00000614240 GABBR1Q9UBS5 961 aa20.23■□□□□ 0.83
SMN2-213ENST00000614240 BARX2Q9UMQ3 279 aaPredicted RBP20.23■□□□□ 0.83
SMN2-213ENST00000614240 MAFBQ9Y5Q3 323 aaPredicted RBP20.23■□□□□ 0.83
SMN2-213ENST00000614240 PER2O15055 1255 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 MAGEB2O15479 319 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 FGF18O76093 207 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 FGFR1P11362 822 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 COASYQ13057 564 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 HERC4Q5GLZ8 1057 aaPredicted RBP20.22■□□□□ 0.83
SMN2-213ENST00000614240 COLGALT1Q8NBJ5 622 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 BICD2Q8TD16 824 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 CRYGNQ8WXF5 182 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 FAM167AQ96KS9 214 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 MFSD14AQ96MC6 490 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 JAKMIP1Q96N16 626 aaKnown RBP20.22■□□□□ 0.83
SMN2-213ENST00000614240 MAP7D2Q96T17 732 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 TMEM161AQ9NX61 479 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 AKT3Q9Y243 479 aa20.22■□□□□ 0.83
SMN2-213ENST00000614240 PRPF3O43395 683 aaKnown RBP20.21■□□□□ 0.83
SMN2-213ENST00000614240 GPR32O75388 356 aa20.21■□□□□ 0.83
SMN2-213ENST00000614240 LAG3P18627 525 aa20.21■□□□□ 0.83
SMN2-213ENST00000614240 TMOD1P28289 359 aa20.21■□□□□ 0.83
SMN2-213ENST00000614240 CLCN3P51790 818 aa20.21■□□□□ 0.83
SMN2-213ENST00000614240 EFCAB12Q6NXP0 572 aa20.21■□□□□ 0.83
SMN2-213ENST00000614240 BLOC1S2Q6QNY1 142 aa20.21■□□□□ 0.83
SMN2-213ENST00000614240 HFE2Q6ZVN8 426 aa20.21■□□□□ 0.83
SMN2-213ENST00000614240 ALYREFQ86V81 257 aaKnown RBP20.21■□□□□ 0.83
SMN2-213ENST00000614240 FAM228AQ86W67 206 aa20.21■□□□□ 0.83
SMN2-213ENST00000614240 SMRP1Q8NCR6 262 aa20.21■□□□□ 0.83
SMN2-213ENST00000614240 USP15Q9Y4E8 981 aaPredicted RBP20.21■□□□□ 0.83
SMN2-213ENST00000614240 ATG2AQ2TAZ0 1938 aa20.2■□□□□ 0.82
SMN2-213ENST00000614240 ADAMTS3O15072 1205 aa20.2■□□□□ 0.82
SMN2-213ENST00000614240 ZSCAN20P17040 1043 aaPredicted RBP20.2■□□□□ 0.82
SMN2-213ENST00000614240 NLRP11P59045 1033 aaKnown RBP20.2■□□□□ 0.82
SMN2-213ENST00000614240 PDE12Q6L8Q7 609 aaKnown RBP20.2■□□□□ 0.82
SMN2-213ENST00000614240 ABI1Q8IZP0 508 aa20.2■□□□□ 0.82
SMN2-213ENST00000614240 RASGRP4Q8TDF6 673 aa20.2■□□□□ 0.82
SMN2-213ENST00000614240 PHKBQ93100 1093 aa20.2■□□□□ 0.82
SMN2-213ENST00000614240 SCLT1Q96NL6 688 aa20.2■□□□□ 0.82
SMN2-213ENST00000614240 CDCA3Q99618 268 aaPredicted RBP20.2■□□□□ 0.82
SMN2-213ENST00000614240 ELAC1Q9H777 363 aaKnown RBP20.2■□□□□ 0.82
SMN2-213ENST00000614240 NRBP2Q9NSY0 501 aa20.2■□□□□ 0.82
SMN2-213ENST00000614240 HCSTQ9UBK5 93 aa20.2■□□□□ 0.82
SMN2-213ENST00000614240 PUF60Q9UHX1 559 aaKnown RBP20.2■□□□□ 0.82
SMN2-213ENST00000614240 FSD2A1L4K1 749 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 WDR64B1ANS9 1081 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 HOXA2O43364 376 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 GLP2RO95838 553 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 SRGAP2BP0DMP2 458 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 FAM189BP81408 668 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 PKN1Q16512 942 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 RNF169Q8NCN4 708 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 EDAQ92838 391 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 TMEM117Q9H0C3 514 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 KCNH6Q9H252 994 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 MUC6Q6W4X9 2439 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 LOXHD1Q8IVV2 1947 aa20.19■□□□□ 0.82
SMN2-213ENST00000614240 CIITAP33076 1130 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 ERVFC1P60507 584 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 DSC3Q14574 896 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 DUSP6Q16828 381 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 PLPP4Q5VZY2 271 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 LRRC71Q8N4P6 559 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 CCDC136Q96JN2 1154 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 RPGRIP1Q96KN7 1286 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 FBXL18Q96ME1 805 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 SLC26A6Q9BXS9 759 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 CWH43Q9H720 699 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 ENTPD7Q9NQZ7 604 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 DISC1Q9NRI5 854 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 KIAA1671Q9BY89 1806 aa20.18■□□□□ 0.82
SMN2-213ENST00000614240 CHMP2AO43633 222 aa20.17■□□□□ 0.82
SMN2-213ENST00000614240 GAS7O60861 476 aa20.17■□□□□ 0.82
SMN2-213ENST00000614240 OATP04181 439 aa20.17■□□□□ 0.82
SMN2-213ENST00000614240 RBM10P98175 930 aaKnown RBP20.17■□□□□ 0.82
SMN2-213ENST00000614240 KRT17Q04695 432 aa20.17■□□□□ 0.82
SMN2-213ENST00000614240 ZNF710Q8N1W2 664 aa20.17■□□□□ 0.82
SMN2-213ENST00000614240 MRPS27Q92552 414 aaKnown RBP20.17■□□□□ 0.82
SMN2-213ENST00000614240 ZNF668Q96K58 619 aaPredicted RBP20.17■□□□□ 0.82
SMN2-213ENST00000614240 PHF7Q9BWX1 381 aaPredicted RBP20.17■□□□□ 0.82
SMN2-213ENST00000614240 LZTS1Q9Y250 596 aa20.17■□□□□ 0.82
SMN2-213ENST00000614240 LOC730098B7Z3J9 87 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 EIF4BP23588 611 aaKnown RBP20.16■□□□□ 0.82
SMN2-213ENST00000614240 NLRP5P59047 1200 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 PRKCEQ02156 737 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 NHLH1Q02575 133 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 LRRC43Q8N309 656 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 ZNF558Q96NG5 402 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 CASD1Q96PB1 797 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 TCF25Q9BQ70 676 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 RNF26Q9BY78 433 aaPredicted RBP20.16■□□□□ 0.82
SMN2-213ENST00000614240 ADAMTS10Q9H324 1103 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 VPS54Q9P1Q0 977 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 SNX14Q9Y5W7 946 aa20.16■□□□□ 0.82
SMN2-213ENST00000614240 FSCN2O14926 492 aa20.15■□□□□ 0.82
SMN2-213ENST00000614240 MSH4O15457 936 aa20.15■□□□□ 0.82
SMN2-213ENST00000614240 RPS6KB1P23443 525 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms