RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 RCN2Q14257 317 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 MDM1Q8TC05 714 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
VPS36-207ENST00000611132 COL15A1P39059 1388 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 FSBPO95073 299 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 RNF207Q6ZRF8 634 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 FRMD5Q7Z6J6 570 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 PCIF1Q9H4Z3 704 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 BIRC2Q13490 618 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 TRAPPC3LQ5T215 181 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 SEPT14Q6ZU15 432 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 ZC3H18Q86VM9 953 aaKnown RBP15.75■□□□□ 0.11
VPS36-207ENST00000611132 CNPY4Q8N129 248 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 NSMCE1Q8WV22 266 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 NUDCD1Q96RS6 583 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 ANO3Q9BYT9 981 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 KBTBD4Q9NVX7 518 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.75■□□□□ 0.11
VPS36-207ENST00000611132 ADAMTS13Q76LX8 1427 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 WDR91A4D1P6 747 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 INHBAP08476 426 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 UCHL3P15374 230 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 NR1H3Q13133 447 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 CCDC14Q49A88 953 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 CREG2Q8IUH2 290 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 OSBPL1AQ9BXW6 950 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 GOLPH3Q9H4A6 298 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 PPP1R9AQ9ULJ8 1098 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 USP17L5A8MUK1 530 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 CD19P15391 556 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 GALCP54803 685 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 CAV1Q03135 178 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 PAF1Q8N7H5 531 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 TEKT3Q9BXF9 490 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 CELF4Q9BZC1 486 aaKnown RBP15.74■□□□□ 0.11
VPS36-207ENST00000611132 ANGPTL2Q9UKU9 493 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 LEMD3Q9Y2U8 911 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 TMEM131LA2VDJ0 1609 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 RASSF10A6NK89 507 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 NOL3O60936 208 aaKnown RBP15.74■□□□□ 0.11
VPS36-207ENST00000611132 TRPC3Q13507 836 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 SH3RF1Q7Z6J0 888 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 TAB3Q8N5C8 712 aaPredicted RBP15.74■□□□□ 0.11
VPS36-207ENST00000611132 ATP2A3Q93084 1043 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 NACC1Q96RE7 527 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 A0A087X0T9 212 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 SFI1A8K8P3 1242 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 PDE2AO00408 941 aaPredicted RBP15.74■□□□□ 0.11
VPS36-207ENST00000611132 DKC1O60832 514 aaKnown RBP eCLIP15.74■□□□□ 0.11
VPS36-207ENST00000611132 FAM228BP0C875 321 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 LRRC23Q53EV4 343 aaPredicted RBP15.74■□□□□ 0.11
VPS36-207ENST00000611132 SH3RF3Q8TEJ3 882 aaPredicted RBP15.74■□□□□ 0.11
VPS36-207ENST00000611132 THRAP3Q9Y2W1 955 aaKnown RBP15.74■□□□□ 0.11
VPS36-207ENST00000611132 SPATA31D1Q6ZQQ2 1576 aa15.74■□□□□ 0.11
VPS36-207ENST00000611132 MEA1Q16626 185 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 ARHGAP27Q6ZUM4 889 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 TSEN2Q8NCE0 465 aaKnown RBP15.73■□□□□ 0.11
VPS36-207ENST00000611132 CCDC17Q96LX7 622 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 BCAP29Q9UHQ4 241 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 PREX1Q8TCU6 1659 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 ABCB11O95342 1321 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 SGK1O00141 431 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 GYG2O15488 501 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 GGPS1O95749 300 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 ACTN1P12814 892 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 PMS1P54277 932 aaKnown RBP15.73■□□□□ 0.11
VPS36-207ENST00000611132 AMPD2Q01433 879 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 FAM102BQ5T8I3 360 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 ERP44Q9BS26 406 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 Q9H521 79 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 ANKRD26Q9UPS8 1709 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 ENO4A6NNW6 628 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 SOX5P35711 763 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 SWT1Q5T5J6 900 aaKnown RBP15.73■□□□□ 0.11
VPS36-207ENST00000611132 NSMFQ6X4W1 530 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 TMEM206Q9H813 350 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 TMOD4Q9NZQ9 345 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 SERPINB13Q9UIV8 391 aa15.73■□□□□ 0.11
VPS36-207ENST00000611132 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 FTLP02792 175 aaPredicted RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 MT-ND3P03897 115 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 POLR2MP0CAP2 368 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 CASP7P55210 303 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 YWHAGP61981 247 aaKnown RBP eCLIP15.72■□□□□ 0.11
VPS36-207ENST00000611132 ICA1Q05084 483 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 METTL13Q8N6R0 699 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 SYT2Q8N9I0 419 aaPredicted RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 ACCSQ96QU6 501 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 ZFP69BQ9UJL9 534 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 INTUQ9ULD6 942 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 PFASO15067 1338 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 MINPP1Q9UNW1 487 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 ZSCAN5CA6NGD5 496 aaPredicted RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 MYCLP12524 364 aaPredicted RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 ATP2B4P23634 1241 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 SERPINB6P35237 376 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 PSMC4P43686 418 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 SEPT6Q14141 434 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 ZYXQ15942 572 aaKnown RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 HADHQ16836 314 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms