RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 TJP2Q9UDY2 1190 aa8.12□□□□□ -1.11
FARP1-241ENST00000602272 HERC5Q9UII4 1024 aaKnown RBP8.12□□□□□ -1.11
FARP1-241ENST00000602272 ZNF112Q9UJU3 913 aa8.12□□□□□ -1.11
FARP1-241ENST00000602272 ADAM30Q9UKF2 790 aa8.12□□□□□ -1.11
FARP1-241ENST00000602272 PALD1Q9ULE6 856 aa8.12□□□□□ -1.11
FARP1-241ENST00000602272 CCDC171Q6TFL3 1326 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 WDR33Q9C0J8 1336 aaKnown RBP8.11□□□□□ -1.11
FARP1-241ENST00000602272 GSG1L2A8MUP6 293 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 FAM155AB1AL88 458 aaPredicted RBP8.11□□□□□ -1.11
FARP1-241ENST00000602272 C8AP07357 584 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 PLCG1P19174 1290 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 MCM4P33991 863 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 ECE1P42892 770 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 CDK5R2Q13319 367 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 VGLL4Q14135 290 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 SLC4A8Q2Y0W8 1093 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 MCMDC2Q4G0Z9 681 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 BMP2KLQ5H9B9 411 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 GIMAP6Q6P9H5 292 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 CCDC129Q6ZRS4 1044 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 GK5Q6ZS86 529 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 SPRED2Q7Z698 418 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 TTC6Q86TZ1 520 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 RASAL3Q86YV0 1011 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 HID1Q8IV36 788 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
FARP1-241ENST00000602272 CLMNQ96JQ2 1002 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 CAPNS2Q96L46 248 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 SPATA32Q96LK8 384 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 WRNIP1Q96S55 665 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 DNAJC18Q9H819 358 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.11□□□□□ -1.11
FARP1-241ENST00000602272 EPB41L4AQ9HCS5 686 aaPredicted RBP8.11□□□□□ -1.11
FARP1-241ENST00000602272 MCM9Q9NXL9 1143 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 ARPP21Q9UBL0 812 aaPredicted RBP8.11□□□□□ -1.11
FARP1-241ENST00000602272 REV1Q9UBZ9 1251 aa8.11□□□□□ -1.11
FARP1-241ENST00000602272 LAMA4Q16363 1823 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 PHIPQ8WWQ0 1821 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 RAD50Q92878 1312 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 MYH8P13535 1937 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 FOXP2O15409 715 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 DNAJA2O60884 412 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 PAPLNO95428 1278 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 CYP2D6P10635 497 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 FUT4P22083 530 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 CAP2P40123 477 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 SOX9P48436 509 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 ZNF165P49910 485 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 PLCD1P51178 756 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 GABPAQ06546 454 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 IFI16Q16666 785 aaKnown RBP8.1□□□□□ -1.11
FARP1-241ENST00000602272 SBK1Q52WX2 424 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 NOL9Q5SY16 702 aaKnown RBP8.1□□□□□ -1.11
FARP1-241ENST00000602272 C12orf60Q5U649 245 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 CTR9Q6PD62 1173 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 CWC27Q6UX04 472 aaKnown RBP8.1□□□□□ -1.11
FARP1-241ENST00000602272 ZNF574Q6ZN55 896 aaPredicted RBP8.1□□□□□ -1.11
FARP1-241ENST00000602272 ZNF589Q86UQ0 364 aaPredicted RBP8.1□□□□□ -1.11
FARP1-241ENST00000602272 FOXP4Q8IVH2 680 aaPredicted RBP8.1□□□□□ -1.11
FARP1-241ENST00000602272 AMOTL1Q8IY63 956 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 IFNL3Q8IZI9 196 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 CRACR2BQ8N4Y2 399 aaPredicted RBP8.1□□□□□ -1.11
FARP1-241ENST00000602272 ZKSCAN4Q969J2 545 aaPredicted RBP8.1□□□□□ -1.11
FARP1-241ENST00000602272 SERPINB13Q9UIV8 391 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 EFR3BQ9Y2G0 817 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 ROBO3Q96MS0 1386 aa8.1□□□□□ -1.11
FARP1-241ENST00000602272 TMEM265A0A087WTH1 108 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 CYP2D7A0A087X1C5 515 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 CTNND1O60716 968 aaKnown RBP8.09□□□□□ -1.11
FARP1-241ENST00000602272 APPP05067 770 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 ZBTB48P10074 688 aaPredicted RBP8.09□□□□□ -1.11
FARP1-241ENST00000602272 CHMLP26374 656 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 TDO2P48775 406 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 JAG1P78504 1218 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 NOGQ13253 232 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 GRM1Q13255 1194 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 COL9A2Q14055 689 aaPredicted RBP8.09□□□□□ -1.11
FARP1-241ENST00000602272 RRP1BQ14684 758 aaKnown RBP8.09□□□□□ -1.11
FARP1-241ENST00000602272 VPS53Q5VIR6 699 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 MCATQ8IVS2 390 aaKnown RBP8.09□□□□□ -1.11
FARP1-241ENST00000602272 MRPL41Q8IXM3 137 aaKnown RBP8.09□□□□□ -1.11
FARP1-241ENST00000602272 SCYL3Q8IZE3 742 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 PLD6Q8N2A8 252 aaKnown RBP8.09□□□□□ -1.11
FARP1-241ENST00000602272 WNK4Q96J92 1243 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 NACAP1Q9BZK3 213 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 IL25Q9H293 177 aa8.09□□□□□ -1.11
FARP1-241ENST00000602272 ARID1BQ8NFD5 2236 aaPredicted RBP8.09□□□□□ -1.12
FARP1-241ENST00000602272 ZMYM6O95789 1325 aa8.08□□□□□ -1.12
FARP1-241ENST00000602272 GREB1LQ9C091 1923 aaPredicted RBP8.08□□□□□ -1.12
FARP1-241ENST00000602272 SMIM22K7EJ46 135 aa8.08□□□□□ -1.12
FARP1-241ENST00000602272 LRIG2O94898 1065 aa8.08□□□□□ -1.12
FARP1-241ENST00000602272 HSPD1P10809 573 aaKnown RBP8.08□□□□□ -1.12
FARP1-241ENST00000602272 ATF4P18848 351 aaPredicted RBP8.08□□□□□ -1.12
FARP1-241ENST00000602272 SHMT1P34896 483 aa8.08□□□□□ -1.12
FARP1-241ENST00000602272 MAP2K2P36507 400 aa8.08□□□□□ -1.12
FARP1-241ENST00000602272 BNIP3Q12983 259 aa8.08□□□□□ -1.12
FARP1-241ENST00000602272 ALX1Q15699 326 aa8.08□□□□□ -1.12
FARP1-241ENST00000602272 NAALADL2Q58DX5 795 aa8.08□□□□□ -1.12
FARP1-241ENST00000602272 TATDN1Q6P1N9 297 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms