RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 MASTLQ96GX5 879 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 MRIQ9BWK5 157 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 ZNF219Q9P2Y4 722 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 NOC2LQ9Y3T9 749 aaKnown RBP22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 CFBP00751 764 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 ECHS1P30084 290 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 DDX42Q86XP3 938 aaKnown RBP eCLIP22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 DDX47Q9H0S4 455 aaKnown RBP22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 PGRMC1O00264 195 aaKnown RBP22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 EVI5O60447 810 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 GAP43P17677 238 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 PDE6BP35913 854 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 MAGEA9P43362 315 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 RBM26Q5T8P6 1007 aaKnown RBP22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 LRCH2Q5VUJ6 765 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 BTNL9Q6UXG8 535 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 C1orf186Q6ZWK4 172 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 COL23A1Q86Y22 540 aaPredicted RBP22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 NLGN1Q8N2Q7 840 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 LNX1Q8TBB1 728 aaPredicted RBP22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 ISCUQ9H1K1 167 aa22.05■■□□□ 1.12
SHKBP1-225ENST00000600733 GTPBP10A4D1E9 387 aaKnown RBP22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 PIK3CDO00329 1044 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 SART1O43290 800 aaKnown RBP22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 PSMC2P35998 433 aaKnown RBP22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 ECE1P42892 770 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 DAAM2Q86T65 1068 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.04■■□□□ 1.127e-6■■■■□ 21.2
SHKBP1-225ENST00000600733 MMP10P09238 476 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 ITGA4P13612 1032 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 GALCP54803 685 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 KIAA1755Q5JYT7 1200 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 SLFN11Q7Z7L1 901 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 OLIG1Q8TAK6 271 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 RNPC3Q96LT9 517 aaKnown RBP22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 PARVGQ9HBI0 331 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 PLAAQ9Y263 795 aa22.04■■□□□ 1.12
SHKBP1-225ENST00000600733 F8VZ95 297 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 EIF3DO15371 548 aaKnown RBP eCLIP22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 FERP16591 822 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 ANXA13P27216 316 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 HSPA9P38646 679 aaKnown RBP22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 STAT1P42224 750 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 HDLBPQ00341 1268 aaKnown RBP22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 GLYCTKQ8IVS8 523 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 OSGEPQ9NPF4 335 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 WRAP73Q9P2S5 460 aaPredicted RBP22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 STXBP5LQ9Y2K9 1186 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 SHTN1A0MZ66 631 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 KRIT1O00522 736 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 EBAG9O00559 213 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 PSMD10O75832 226 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 FMO5P49326 533 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 MAATS1Q7Z4T9 603 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 NT5DC3Q86UY8 548 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 CD302Q8IX05 232 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 CSRNP1Q96S65 589 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 FIZ1Q96SL8 496 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 TUFT1Q9NNX1 390 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 SERPINA10Q9UK55 444 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 TRPC5Q9UL62 973 aaPredicted RBP22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 SAMM50Q9Y512 469 aa22.03■■□□□ 1.12
SHKBP1-225ENST00000600733 ZEB2O60315 1214 aa22.02■■□□□ 1.12
SHKBP1-225ENST00000600733 CYP2J2P51589 502 aa22.02■■□□□ 1.12
SHKBP1-225ENST00000600733 STAT2P52630 851 aa22.02■■□□□ 1.12
SHKBP1-225ENST00000600733 GUCY1A3Q02108 690 aa22.02■■□□□ 1.12
SHKBP1-225ENST00000600733 CBWD6Q4V339 395 aa22.02■■□□□ 1.12
SHKBP1-225ENST00000600733 CBWD3Q5JTY5 395 aa22.02■■□□□ 1.12
SHKBP1-225ENST00000600733 CBWD5Q5RIA9 395 aa22.02■■□□□ 1.12
SHKBP1-225ENST00000600733 CALR3Q96L12 384 aaKnown RBP22.02■■□□□ 1.12
SHKBP1-225ENST00000600733 NEUROG2Q9H2A3 272 aa22.02■■□□□ 1.12
SHKBP1-225ENST00000600733 A0A0A6YYK5 440 aaPredicted RBP22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 NPM3O75607 178 aaKnown RBP22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 CLSTN1O94985 981 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 TRIM49P0CI25 452 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 TRIM49CP0CI26 452 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 SOX5P35711 763 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 DRAP1Q14919 205 aaPredicted RBP22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 SLC15A2Q16348 729 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 CEP85LQ5SZL2 805 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 CCDC174Q6PII3 467 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 KDM7AQ6ZMT4 941 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 SLC30A5Q8TAD4 765 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 SUCLA2Q9P2R7 463 aaPredicted RBP22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 AMACRQ9UHK6 382 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 DNAJC12Q9UKB3 198 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 PPP1R12BO60237 982 aaPredicted RBP22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 NR1D1P20393 614 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 ACER1Q8TDN7 264 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 LMBR1Q8WVP7 490 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 INTUQ9ULD6 942 aa22.01■■□□□ 1.11
SHKBP1-225ENST00000600733 ATRNL1Q5VV63 1379 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 IGSF9BQ9UPX0 1349 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 ABCB4P21439 1286 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 HSD17B3P37058 310 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 PPP2R5CQ13362 524 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 CUL1Q13616 776 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 MSL1Q68DK7 614 aa22■■□□□ 1.11
SHKBP1-225ENST00000600733 ZNF720Q7Z2F6 126 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms