RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ST3GAL5Q9UNP4 418 aa11.83□□□□□ -0.52
CCDC9-203ENST00000596938 GINS2Q9Y248 185 aa11.83□□□□□ -0.52
CCDC9-203ENST00000596938 REV3LO60673 3130 aa11.83□□□□□ -0.52
CCDC9-203ENST00000596938 SPTBN5Q9NRC6 3674 aaKnown RBP11.83□□□□□ -0.52
CCDC9-203ENST00000596938 IGKV6-21A0A0C4DH24 114 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 DDX11L8A8MPP1 907 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 H3BNC9 293 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 MARCH6O60337 910 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 VTNP04004 478 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 RB1P06400 928 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 P4HBP07237 508 aaKnown RBP11.82□□□□□ -0.52
CCDC9-203ENST00000596938 STAG3L1P0CL83 205 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 QARSP47897 775 aaKnown RBP11.82□□□□□ -0.52
CCDC9-203ENST00000596938 DNM2P50570 870 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 CLCN3P51790 818 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 NLRP11P59045 1033 aaKnown RBP11.82□□□□□ -0.52
CCDC9-203ENST00000596938 FAM189BP81408 668 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 MRPS5P82675 430 aaKnown RBP11.82□□□□□ -0.52
CCDC9-203ENST00000596938 TBC1D8BQ0IIM8 1120 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 EPHA7Q15375 998 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 TMEM266Q2M3C6 531 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 SLC24A5Q71RS6 500 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 NPAS4Q8IUM7 802 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 DIS3L2Q8IYB7 885 aaKnown RBP11.82□□□□□ -0.52
CCDC9-203ENST00000596938 MICALL1Q8N3F8 863 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 CLP1Q92989 425 aaKnown RBP11.82□□□□□ -0.52
CCDC9-203ENST00000596938 ASB2Q96Q27 587 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 MAP7D2Q96T17 732 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 RGS18Q9NS28 235 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 C1orf112Q9NSG2 853 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 AKT3Q9Y243 479 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 RWDD3Q9Y3V2 267 aa11.82□□□□□ -0.52
CCDC9-203ENST00000596938 FAM205CA6NFA0 338 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 C5orf67F2Z3F1 127 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 MAFO75444 373 aaPredicted RBP11.81□□□□□ -0.52
CCDC9-203ENST00000596938 LINC00271P0C7V0 271 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 EIF4BP23588 611 aaKnown RBP11.81□□□□□ -0.52
CCDC9-203ENST00000596938 BMPR1AP36894 532 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 SARSP49591 514 aaKnown RBP11.81□□□□□ -0.52
CCDC9-203ENST00000596938 HMGN5P82970 282 aaKnown RBP11.81□□□□□ -0.52
CCDC9-203ENST00000596938 SPIRE1Q08AE8 756 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 SAFBQ15424 915 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCDC9-203ENST00000596938 ANO5Q75V66 913 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 FAM228AQ86W67 206 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 C4orf19Q8IY42 314 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 LRRC71Q8N4P6 559 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 BANK1Q8NDB2 785 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 GDPD5Q8WTR4 605 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 MRPL38Q96DV4 380 aaKnown RBP11.81□□□□□ -0.52
CCDC9-203ENST00000596938 OSMRQ99650 979 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 ADAM2Q99965 735 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 JPH2Q9BR39 696 aaPredicted RBP11.81□□□□□ -0.52
CCDC9-203ENST00000596938 SEPT9Q9UHD8 586 aaPredicted RBP11.81□□□□□ -0.52
CCDC9-203ENST00000596938 PCDHA12Q9UN75 941 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 COG5Q9UP83 839 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 PPME1Q9Y570 386 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 ADGRA3Q8IWK6 1321 aa11.81□□□□□ -0.52
CCDC9-203ENST00000596938 DENND3A2RUS2 1198 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 C9IYK1 514 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 MGEA5O60502 916 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 DARSP14868 501 aaKnown RBP11.8□□□□□ -0.52
CCDC9-203ENST00000596938 GPC3P51654 580 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 GPM6BQ13491 265 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 BTG3Q14201 252 aaPredicted RBP11.8□□□□□ -0.52
CCDC9-203ENST00000596938 DSC3Q14574 896 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 RABEP1Q15276 862 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
CCDC9-203ENST00000596938 PTPROQ16827 1216 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 AAK1Q2M2I8 961 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 MTERF2Q49AM1 385 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 POTEDQ86YR6 584 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 EXOC8Q8IYI6 725 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 CMTR2Q8IYT2 770 aaKnown RBP11.8□□□□□ -0.52
CCDC9-203ENST00000596938 MTMR9Q96QG7 549 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 ELAC1Q9H777 363 aaKnown RBP11.8□□□□□ -0.52
CCDC9-203ENST00000596938 CYP26B1Q9NR63 512 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 LRFN2Q9ULH4 789 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 PCDHB7Q9Y5E2 793 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 COL4A6Q14031 1691 aa11.8□□□□□ -0.52
CCDC9-203ENST00000596938 TMEM150BA6NC51 233 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 SLITRK3O94933 977 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 CALCRLQ16602 461 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 NAALADL2Q58DX5 795 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 OTUD6AQ7L8S5 288 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 FBXO18Q8NFZ0 1043 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 HLA-CQ95604 372 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 C8orf76Q96K31 380 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 PPP1R16BQ96T49 567 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 HSD17B14Q9BPX1 270 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 C11orf84Q9BUA3 381 aaPredicted RBP11.79□□□□□ -0.52
CCDC9-203ENST00000596938 PLVAPQ9BX97 442 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 FOXP1Q9H334 677 aaPredicted RBP11.79□□□□□ -0.52
CCDC9-203ENST00000596938 ZSWIM4Q9H7M6 989 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 RGL1Q9NZL6 768 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 SUCLA2Q9P2R7 463 aaPredicted RBP11.79□□□□□ -0.52
CCDC9-203ENST00000596938 WRAP73Q9P2S5 460 aaPredicted RBP11.79□□□□□ -0.52
CCDC9-203ENST00000596938 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
CCDC9-203ENST00000596938 NEMFO60524 1076 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms