RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-228	ENST00000592621	ZNF396	Q96N95	335 aa	Predicted RBP	13.05	□□□□□ -0.32
RANBP3-228	ENST00000592621	DBR1	Q9UK59	544 aa	Known RBP	13.05	□□□□□ -0.32
RANBP3-228	ENST00000592621	CDY2A	Q9Y6F7	541 aa		13.05	□□□□□ -0.32
RANBP3-228	ENST00000592621	GPR32	O75388	356 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	YEATS4	O95619	227 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	MARCKS	P29966	332 aa	Predicted RBP	13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	RFC5	P40937	340 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	TMEM62	Q0P6H9	643 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	PLEKHG4	Q58EX7	1191 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	XKR9	Q5GH70	373 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	IER5	Q5VY09	327 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	ATL3	Q6DD88	541 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	DEFB128	Q7Z7B8	93 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	TDH	Q8IZJ6	230 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	METTL13	Q8N6R0	699 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	PNMA5	Q96PV4	448 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	NACC1	Q96RE7	527 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	CELF4	Q9BZC1	486 aa	Known RBP	13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	CDHR5	Q9HBB8	845 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	XPNPEP1	Q9NQW7	623 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	DDX19A	Q9NUU7	478 aa	Known RBP	13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	TFIP11	Q9UBB9	837 aa	Known RBP	13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	KIAA1024	Q9UPX6	916 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	TRPV2	Q9Y5S1	764 aa		13.04	□□□□□ -0.32
RANBP3-228	ENST00000592621	SLC26A4	O43511	780 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	PPP6R2	O75170	966 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	VTN	P04004	478 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	TMOD1	P28289	359 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	DNM1	Q05193	864 aa	Known RBP	13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	GRB10	Q13322	594 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	LPIN1	Q14693	890 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	TMEM119	Q4V9L6	283 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	FBXO47	Q5MNV8	452 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	KCNK18	Q7Z418	384 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	CABP7	Q86V35	215 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	KCTD17	Q8N5Z5	321 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	LRRC15	Q8TF66	581 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	SLC7A3	Q8WY07	619 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	HERVK_113	Q902F9	699 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	CLIC6	Q96NY7	704 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	JPH2	Q9BR39	696 aa	Predicted RBP	13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	CSRNP2	Q9H175	543 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	ADAMTS10	Q9H324	1103 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	SUGCT	Q9HAC7	445 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	DAXX	Q9UER7	740 aa	Predicted RBP	13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621	SQOR	Q9Y6N5	450 aa		13.03	□□□□□ -0.32
RANBP3-228	ENST00000592621		E9PMD0	336 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	SPTLC2	O15270	562 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	GAS2	O43903	313 aa	Known RBP	13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	DGAT1	O75907	488 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	FGB	P02675	491 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	GPC3	P51654	580 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	POLG	P54098	1239 aa	Predicted RBP	13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	EMC2	Q15006	297 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	STK38	Q15208	465 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	CNKSR3	Q6P9H4	555 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	USP49	Q70CQ1	688 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	EXOC8	Q8IYI6	725 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	DBF4B	Q8NFT6	615 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	TMEM40	Q8WWA1	233 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	CHAMP1	Q96JM3	812 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	CCSER1	Q9C0I3	900 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	AGO3	Q9H9G7	860 aa	Known RBP	13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621	AKT3	Q9Y243	479 aa		13.02	□□□□□ -0.33
RANBP3-228	ENST00000592621		M0QZ92	97 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	EYA4	O95677	639 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	GHR	P10912	638 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	ANP32A	P39687	249 aa	Known RBP	13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	CRYBB1	P53674	252 aa	Predicted RBP	13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	NLRP11	P59045	1033 aa	Known RBP	13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	KIZ	Q2M2Z5	673 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	SPECC1	Q5M775	1068 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	TSHZ1	Q6ZSZ6	1077 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	OTOP2	Q7RTS6	562 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	ZNF710	Q8N1W2	664 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	KRI1	Q8N9T8	703 aa	Known RBP	13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	USP38	Q8NB14	1042 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	TMEM143	Q96AN5	459 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	EPSTI1	Q96J88	318 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	MAP7D2	Q96T17	732 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	MTR	Q99707	1265 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	NT5C3A	Q9H0P0	336 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	BHMT2	Q9H2M3	363 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	RCOR1	Q9UKL0	485 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	CFAP45	Q9UL16	551 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	EVPL	Q92817	2033 aa		13.01	□□□□□ -0.33
RANBP3-228	ENST00000592621	CEP290	O15078	2479 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	TET1	Q8NFU7	2136 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	USO1	O60763	962 aa	Known RBP	13	□□□□□ -0.33
RANBP3-228	ENST00000592621	BAIAP3	O94812	1187 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	ARL2	P36404	184 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	UBA7	P41226	1012 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	DNM2	P50570	870 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	NUCB2	P80303	420 aa		13	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms