RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 MMP16P51512 607 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 RBL2Q08999 1139 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 NR5A1Q13285 461 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 GRIK4Q16099 956 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 SWSAP1Q6NVH7 229 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 PDXDC2PQ6P474 469 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 POTEGQ6S5H5 508 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 ABHD15Q6UXT9 468 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 CKAP2LQ8IYA6 745 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 DIS3L2Q8IYB7 885 aaKnown RBP11.7□□□□□ -0.54
SDF2-208ENST00000589788 SLC5A5Q92911 643 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 PCYT2Q99447 389 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 TEKT3Q9BXF9 490 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 ZNF302Q9NR11 478 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 TUBE1Q9UJT0 475 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 PCDHA10Q9Y5I2 948 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 IGKV6D-21A0A0A0MT36 114 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 RRN3P2A6NIE6 340 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 WDR64B1ANS9 1081 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 BTBD18B2RXH4 712 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 CHMP2AO43633 222 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 MARCH6O60337 910 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 CCNT1O60563 726 aaKnown RBP11.69□□□□□ -0.54
SDF2-208ENST00000589788 CAND2O75155 1236 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 INSRRP14616 1297 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 SFNP31947 248 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 IGBP1P78318 339 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 GUCY1B3Q02153 619 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 GNL2Q13823 731 aaKnown RBP11.69□□□□□ -0.54
SDF2-208ENST00000589788 TRIM71Q2Q1W2 868 aaKnown RBP11.69□□□□□ -0.54
SDF2-208ENST00000589788 ZNF618Q5T7W0 954 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 PPP4R3AQ6IN85 833 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 OTOP2Q7RTS6 562 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 RSPH3Q86UC2 560 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 CCDC60Q8IWA6 550 aaPredicted RBP11.69□□□□□ -0.54
SDF2-208ENST00000589788 HERVK_113Q902F9 699 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 WNT8BQ93098 351 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 MBOAT7Q96N66 472 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 MTRQ99707 1265 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 DISC1Q9NRI5 854 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 KIF3AQ9Y496 699 aa11.69□□□□□ -0.54
SDF2-208ENST00000589788 ZBBXA8MT70 800 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 RSPH10B2B2RC85 870 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 SLC37A4O43826 429 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 HBP1O60381 514 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 PSMD10O75832 226 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 RSPH10BP0C881 870 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 JAK3P52333 1124 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 ADAM17P78536 824 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 SMAD3P84022 425 aaKnown RBP11.68□□□□□ -0.54
SDF2-208ENST00000589788 PLCB4Q15147 1175 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 EARS2Q5JPH6 523 aaKnown RBP11.68□□□□□ -0.54
SDF2-208ENST00000589788 TAF2Q6P1X5 1199 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 MIER3Q7Z3K6 550 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 ETNPPLQ8TBG4 499 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 ATP8B4Q8TF62 1192 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 TNFRSF25Q93038 417 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 GJA10Q969M2 543 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 FAM20AQ96MK3 541 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 ALG2Q9H553 416 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 GABBR1Q9UBS5 961 aa11.68□□□□□ -0.54
SDF2-208ENST00000589788 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.67□□□□□ -0.54
SDF2-208ENST00000589788 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.67□□□□□ -0.54
SDF2-208ENST00000589788 MBLAC1A4D2B0 266 aaPredicted RBP11.67□□□□□ -0.54
SDF2-208ENST00000589788 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
SDF2-208ENST00000589788 BAG4O95429 457 aaKnown RBP11.67□□□□□ -0.54
SDF2-208ENST00000589788 RPLP2P05387 115 aaKnown RBP11.67□□□□□ -0.54
SDF2-208ENST00000589788 CTSHP09668 335 aa11.67□□□□□ -0.54
SDF2-208ENST00000589788 ANP32AP39687 249 aaKnown RBP11.67□□□□□ -0.54
SDF2-208ENST00000589788 RASIP1Q5U651 963 aa11.67□□□□□ -0.54
SDF2-208ENST00000589788 TRMT1LQ7Z2T5 733 aaKnown RBP11.67□□□□□ -0.54
SDF2-208ENST00000589788 FBXO18Q8NFZ0 1043 aa11.67□□□□□ -0.54
SDF2-208ENST00000589788 RDM1Q8NG50 284 aa11.67□□□□□ -0.54
SDF2-208ENST00000589788 FAM167AQ96KS9 214 aa11.67□□□□□ -0.54
SDF2-208ENST00000589788 UNC45AQ9H3U1 944 aa11.67□□□□□ -0.54
SDF2-208ENST00000589788 SLC4A7Q9Y6M7 1214 aa11.67□□□□□ -0.54
SDF2-208ENST00000589788 WDR81Q562E7 1941 aa11.67□□□□□ -0.54
SDF2-208ENST00000589788 TBX3O15119 743 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 NBNO60934 754 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 ADH1BP00325 375 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 CCNYL3P0C7X3 344 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 ZNF484Q5JVG2 852 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 MARCH8Q5T0T0 291 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 CNKSR3Q6P9H4 555 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 RUFY4Q6ZNE9 571 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 SLFN12Q8IYM2 578 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 TRAPPC12Q8WVT3 735 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 DNAJB3Q8WWF6 145 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 VWCEQ96DN2 955 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 FAM49AQ9H0Q0 323 aaPredicted RBP11.66□□□□□ -0.54
SDF2-208ENST00000589788 FOXP1Q9H334 677 aaPredicted RBP11.66□□□□□ -0.54
SDF2-208ENST00000589788 NRBP2Q9NSY0 501 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 CXXC1Q9P0U4 656 aaPredicted RBP11.66□□□□□ -0.54
SDF2-208ENST00000589788 FKBPLQ9UIM3 349 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 MAFBQ9Y5Q3 323 aaPredicted RBP11.66□□□□□ -0.54
SDF2-208ENST00000589788 COL1A2P08123 1366 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 IGSF9BQ9UPX0 1349 aa11.66□□□□□ -0.54
SDF2-208ENST00000589788 TET1Q8NFU7 2136 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms