RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 GNAQP50148 359 aa24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 SLC26A2P50443 739 aa24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 FAM160B1Q5W0V3 765 aa24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 NFXL1Q6ZNB6 911 aa24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 PLCD3Q8N3E9 789 aa24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 C12orf76Q8N812 135 aaPredicted RBP24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 MRPL43Q8N983 215 aaKnown RBP24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 MXRA8Q9BRK3 442 aa24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 IL25Q9H293 177 aa24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 GVINP1Q7Z2Y8 2422 aa24.84■■□□□ 1.57
CAPNS1-205ENST00000588780 C2orf71A6NGG8 1288 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 SPDYE4A6NLX3 237 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 DDX39AO00148 427 aaKnown RBP24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 CLASP2O75122 1294 aaKnown RBP24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 DDAH1O94760 285 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 CRYBB1P53674 252 aaPredicted RBP24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 LRRC55Q6ZSA7 311 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 FAM228AQ86W67 206 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 CKAP2LQ8IYA6 745 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 ZDHHC14Q8IZN3 488 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 CMTR1Q8N1G2 835 aaKnown RBP24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 METTL13Q8N6R0 699 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 CASD1Q96PB1 797 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 FBXL21Q9UKT6 434 aa24.83■■□□□ 1.57
CAPNS1-205ENST00000588780 MYO15AQ9UKN7 3530 aa24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 hCG_1642624A0A1W2PR95 340 aa24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 E7EWF7 191 aa24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 PLEKHA8P1O95397 391 aa24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 CXCL14O95715 111 aa24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 ZSCAN20P17040 1043 aaPredicted RBP24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 SMARCA1P28370 1054 aa24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 FAM189BP81408 668 aa24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 TRMT1LQ7Z2T5 733 aaKnown RBP24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 CYP2W1Q8TAV3 490 aa24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 RWDD1Q9H446 243 aaPredicted RBP24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 NFASCO94856 1347 aa24.82■■□□□ 1.56
CAPNS1-205ENST00000588780 STK25O00506 426 aa24.81■■□□□ 1.56
CAPNS1-205ENST00000588780 ARP10275 920 aa24.81■■□□□ 1.56
CAPNS1-205ENST00000588780 ANGPT1Q15389 498 aa24.81■■□□□ 1.56
CAPNS1-205ENST00000588780 PDXDC2PQ6P474 469 aa24.81■■□□□ 1.56
CAPNS1-205ENST00000588780 HEATR3Q7Z4Q2 680 aa24.81■■□□□ 1.56
CAPNS1-205ENST00000588780 CCDC82Q8N4S0 544 aa24.81■■□□□ 1.56
CAPNS1-205ENST00000588780 SRBD1Q8N5C6 995 aaKnown RBP24.81■■□□□ 1.56
CAPNS1-205ENST00000588780 MAP3K14Q99558 947 aa24.81■■□□□ 1.56
CAPNS1-205ENST00000588780 VTNP04004 478 aa24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 RFX1P22670 979 aa24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 METAP2P50579 478 aaKnown RBP eCLIP24.8■■□□□ 1.564e-11■□□□□ 10.1
CAPNS1-205ENST00000588780 ZNF484Q5JVG2 852 aa24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 KANK3Q6NY19 840 aa24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 CASC1Q6TDU7 716 aa24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 IGDCC4Q8TDY8 1250 aa24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 ACSF2Q96CM8 615 aaPredicted RBP24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 CYP26B1Q9NR63 512 aa24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 DZANK1Q9NVP4 752 aa24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 COL1A2P08123 1366 aa24.8■■□□□ 1.56
CAPNS1-205ENST00000588780 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 CCDC69A6NI79 296 aa24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 PI15O43692 258 aa24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 ZNF76P36508 570 aa24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 ALDH7A1P49419 539 aaKnown RBP24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 CWF19L1Q69YN2 538 aaKnown RBP24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 KIAA1841Q6NSI8 718 aa24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 SMC5Q8IY18 1101 aa24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 TMEM169Q96HH4 297 aa24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 AGO4Q9HCK5 861 aaKnown RBP24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 ZNF302Q9NR11 478 aa24.79■■□□□ 1.56
CAPNS1-205ENST00000588780 NT5C1B-RDH14C9J2C7 533 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 EOMESO95936 686 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 RXRAP19793 462 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 AOC1P19801 751 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 ANTXR2P58335 489 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 PTH1RQ03431 593 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 ITGB3BPQ13352 177 aaPredicted RBP24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 DSC3Q14574 896 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 DGLUCYQ7Z3D6 616 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 CCDC105Q8IYK2 499 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 SLC39A11Q8N1S5 342 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 RUFY2Q8WXA3 655 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 PGBD1Q96JS3 809 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 HINFPQ9BQA5 517 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 RTP3Q9BQQ7 232 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 USTQ9Y2C2 406 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 TAF6LQ9Y6J9 622 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 EVPLQ92817 2033 aa24.78■■□□□ 1.56
CAPNS1-205ENST00000588780 NUCB1Q02818 461 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 CEP55Q53EZ4 464 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 MIS18BP1Q6P0N0 1132 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 TMC5Q6UXY8 1006 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 CABP7Q86V35 215 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 ECHDC2Q86YB7 292 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 DTWD2Q8NBA8 298 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 LY9Q9HBG7 655 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 RNF19AQ9NV58 838 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 AKT3Q9Y243 479 aa24.77■■□□□ 1.56
CAPNS1-205ENST00000588780 EP300Q09472 2414 aaPredicted RBP24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 ATG7O95352 703 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 EPCAMP16422 314 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 TDGQ13569 410 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 SWSAP1Q6NVH7 229 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 RAB11FIP4Q86YS3 637 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms