RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 NEMP1O14524 444 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 B4GALT3O60512 393 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 DNAJC6O75061 913 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 MAFO75444 373 aaPredicted RBP6.65□□□□□ -1.34
USP8-218ENST00000561330 HMGCRP04035 888 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 ETV4P43268 484 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 PHC1P78364 1004 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 NFKB2Q00653 900 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 USP10Q14694 798 aaKnown RBP6.65□□□□□ -1.34
USP8-218ENST00000561330 TERF2Q15554 542 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 GPR155Q7Z3F1 870 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 RALYLQ86SE5 291 aaKnown RBP6.65□□□□□ -1.34
USP8-218ENST00000561330 FERMT3Q86UX7 667 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 AFAP1L2Q8N4X5 818 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 ZNF610Q8N9Z0 462 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 SLC5A5Q92911 643 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 RTEL1Q9NZ71 1219 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 USP36Q9P275 1121 aaKnown RBP6.65□□□□□ -1.34
USP8-218ENST00000561330 Q9UFV3 132 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 INVSQ9Y283 1065 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 DUSP10Q9Y6W6 482 aa6.65□□□□□ -1.34
USP8-218ENST00000561330 BRINP1O60477 761 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 B4GALT4O60513 344 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 RAB11FIP3O75154 756 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 PRPF6O94906 941 aaKnown RBP6.64□□□□□ -1.35
USP8-218ENST00000561330 APOL3O95236 402 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 CTSWP56202 376 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 BCAR1P56945 870 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 ADCY2Q08462 1091 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 NFIXQ14938 502 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 NOLC1Q14978 699 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP8-218ENST00000561330 EIF4HQ15056 248 aaKnown RBP6.64□□□□□ -1.35
USP8-218ENST00000561330 SURF1Q15526 300 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 DDB1Q16531 1140 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 ZFYVE27Q5T4F4 411 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 TMEM200BQ69YZ2 307 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 FILIP1Q7Z7B0 1213 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 RPGRQ92834 1020 aaKnown RBP6.64□□□□□ -1.35
USP8-218ENST00000561330 C20orf173Q96LM9 149 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 MYL10Q9BUA6 226 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 POFUT1Q9H488 388 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 MSRAQ9UJ68 235 aa6.64□□□□□ -1.35
USP8-218ENST00000561330 APOBEC2Q9Y235 224 aaKnown RBP6.64□□□□□ -1.35
USP8-218ENST00000561330 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
USP8-218ENST00000561330 MAFGO15525 162 aa6.63□□□□□ -1.35
USP8-218ENST00000561330 ZNF888P0CJ79 500 aaPredicted RBP6.63□□□□□ -1.35
USP8-218ENST00000561330 ID4P47928 161 aa6.63□□□□□ -1.35
USP8-218ENST00000561330 MYBPC3Q14896 1274 aa6.63□□□□□ -1.35
USP8-218ENST00000561330 BROXQ5VW32 411 aa6.63□□□□□ -1.35
USP8-218ENST00000561330 ZNF662Q6ZS27 426 aa6.63□□□□□ -1.35
USP8-218ENST00000561330 ESPNLQ6ZVH7 1005 aa6.63□□□□□ -1.35
USP8-218ENST00000561330 ZNF496Q96IT1 587 aaPredicted RBP6.63□□□□□ -1.35
USP8-218ENST00000561330 KCMF1Q9P0J7 381 aa6.63□□□□□ -1.35
USP8-218ENST00000561330 PTPN22Q9Y2R2 807 aa6.63□□□□□ -1.35
USP8-218ENST00000561330 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.62□□□□□ -1.35
USP8-218ENST00000561330 PRICKLE3O43900 615 aaPredicted RBP6.62□□□□□ -1.35
USP8-218ENST00000561330 ULK1O75385 1050 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 MEOX1P50221 254 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 STAT4Q14765 748 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 ZNF568Q3ZCX4 644 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 ZMAT1Q5H9K5 638 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 KIAA1841Q6NSI8 718 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 ARHGEF18Q6ZSZ5 1173 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 FRMD7Q6ZUT3 714 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 KANSL1Q7Z3B3 1105 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 RTKN2Q8IZC4 609 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 OR5AN1Q8NGI8 311 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 SAE1Q9UBE0 346 aaPredicted RBP6.62□□□□□ -1.35
USP8-218ENST00000561330 NOC2LQ9Y3T9 749 aaKnown RBP6.62□□□□□ -1.35
USP8-218ENST00000561330 ADAMTS20P59510 1910 aa6.62□□□□□ -1.35
USP8-218ENST00000561330 ZNF536O15090 1300 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 LAMTOR5O43504 91 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 RRADP55042 308 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 SESN3P58005 492 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 PPP2CBP62714 309 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 PPP2CAP67775 309 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 DGKDQ16760 1214 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 ERICH6BQ5W0A0 696 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 TRIM68Q6AZZ1 485 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 LARP4Q71RC2 724 aaKnown RBP eCLIP6.61□□□□□ -1.35
USP8-218ENST00000561330 HDGFL2Q7Z4V5 671 aaPredicted RBP6.61□□□□□ -1.35
USP8-218ENST00000561330 RASSF3Q86WH2 238 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 ATL2Q8NHH9 583 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 FERMT2Q96AC1 680 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 SEMA4AQ9H3S1 761 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 MS4A5Q9H3V2 200 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 JADE2Q9NQC1 790 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 KCNG1Q9UIX4 513 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 SLC4A7Q9Y6M7 1214 aa6.61□□□□□ -1.35
USP8-218ENST00000561330 LCHNA4D1U4 455 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 KDM1AO60341 852 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 EYA4O95677 639 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 PLATP00750 562 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 CANXP27824 592 aaKnown RBP6.6□□□□□ -1.35
USP8-218ENST00000561330 MRE11P49959 708 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 STAT5BP51692 787 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 PCOLCEQ15113 449 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 ZNF827Q17R98 1081 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 LCE1DQ5T752 114 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 UNQ6494/PRO21346Q6UXR6 183 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms