RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 HOXA7P31268 230 aaPredicted RBP11.57□□□□□ -0.56
TPM1-210ENST00000558264 NPEPPSP55786 919 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 C2orf54Q08AI8 447 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 SNRNP48Q6IEG0 339 aaKnown RBP11.57□□□□□ -0.56
TPM1-210ENST00000558264 EHBP1Q8NDI1 1231 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 ZSWIM2Q8NEG5 633 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 PICK1Q9NRD5 415 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 UBIAD1Q9Y5Z9 338 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 TACC1O75410 805 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 CCNE2O96020 404 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 MATR3P43243 847 aaKnown RBP eCLIP11.57□□□□□ -0.56
TPM1-210ENST00000558264 PLA2G4AP47712 749 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 SOX10P56693 466 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 BACE1P56817 501 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 PTK2Q05397 1052 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 KLHDC7AQ5VTJ3 777 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 PAPD7Q5XG87 772 aaKnown RBP11.57□□□□□ -0.56
TPM1-210ENST00000558264 PCNX4Q63HM2 1172 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 DPY19L2P1Q6NXN4 242 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 SCYL3Q8IZE3 742 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 CCDC43Q96MW1 224 aaKnown RBP11.57□□□□□ -0.56
TPM1-210ENST00000558264 PDCD2LQ9BRP1 358 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 TSGA10Q9BZW7 698 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 ARFGAP3Q9NP61 516 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 AGPAT3Q9NRZ7 376 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 TCEAL9Q9UHQ7 104 aa11.57□□□□□ -0.56
TPM1-210ENST00000558264 PACSIN2Q9UNF0 486 aaPredicted RBP11.57□□□□□ -0.56
TPM1-210ENST00000558264 FZD9O00144 591 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 BACH1O14867 736 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 LONRF2Q1L5Z9 754 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 CBWD6Q4V339 395 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 CBWD3Q5JTY5 395 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 CBWD5Q5RIA9 395 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 ZNF280CQ8ND82 737 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 KIFC3Q9BVG8 833 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 GOLPH3Q9H4A6 298 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 LRRN2O75325 713 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 LCA5LO95447 670 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 FTCDO95954 541 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 P4HBP07237 508 aaKnown RBP11.56□□□□□ -0.56
TPM1-210ENST00000558264 KLRC1P26715 233 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 RARRES1P49788 294 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 ZNF662Q6ZS27 426 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 HS2ST1Q7LGA3 356 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 ZNF571Q7Z3V5 609 aaPredicted RBP11.56□□□□□ -0.56
TPM1-210ENST00000558264 GDAP1L1Q96MZ0 367 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 GBP3Q9H0R5 595 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 ABCB6Q9NP58 842 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 SIX2Q9NPC8 291 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 MYH10P35580 1976 aa11.56□□□□□ -0.56
TPM1-210ENST00000558264 SSU72P8A0A1W2PR75 194 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 POLR3GO15318 223 aaPredicted RBP11.55□□□□□ -0.56
TPM1-210ENST00000558264 EIF3DO15371 548 aaKnown RBP eCLIP11.55□□□□□ -0.56
TPM1-210ENST00000558264 EXOC3O60645 756 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 YWHABP31946 246 aaKnown RBP11.55□□□□□ -0.56
TPM1-210ENST00000558264 PSMC2P35998 433 aaKnown RBP11.55□□□□□ -0.56
TPM1-210ENST00000558264 QARSP47897 775 aaKnown RBP11.55□□□□□ -0.56
TPM1-210ENST00000558264 ZNF131P52739 623 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 MAPK8IP2Q13387 824 aaPredicted RBP11.55□□□□□ -0.56
TPM1-210ENST00000558264 KIAA0753Q2KHM9 967 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 GBP6Q6ZN66 633 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 GSPT2Q8IYD1 628 aaKnown RBP11.55□□□□□ -0.56
TPM1-210ENST00000558264 TRIM58Q8NG06 486 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 PKNOX2Q96KN3 472 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 EDEM3Q9BZQ6 932 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 PLEKHA4Q9H4M7 779 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 GFPT2O94808 682 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 BCRP11274 1271 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 HIRAP54198 1017 aaPredicted RBP11.55□□□□□ -0.56
TPM1-210ENST00000558264 DLG4P78352 724 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 TUBB2AQ13885 445 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 KCTD19Q17RG1 926 aaPredicted RBP11.55□□□□□ -0.56
TPM1-210ENST00000558264 DCAF15Q66K64 600 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 IQCEQ6IPM2 695 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 BORCS6Q96GS4 357 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 CBWD1Q9BRT8 395 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 TUBB2BQ9BVA1 445 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 FAM53CQ9NYF3 392 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 ODF2LQ9ULJ1 636 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 SNX12Q9UMY4 172 aa11.55□□□□□ -0.56
TPM1-210ENST00000558264 BRCA1P38398 1863 aaKnown RBP11.54□□□□□ -0.56
TPM1-210ENST00000558264 SLC16A4O15374 487 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 SLC16A3O15427 465 aaKnown RBP11.54□□□□□ -0.56
TPM1-210ENST00000558264 PALMO75781 387 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 GUCY2CP25092 1073 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 PEX3P56589 373 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 RNASE9P60153 205 aaKnown RBP11.54□□□□□ -0.56
TPM1-210ENST00000558264 TMEM132BQ14DG7 1078 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 SLC18A3Q16572 532 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 XKR9Q5GH70 373 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 FAM102BQ5T8I3 360 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 IRF2BP2Q7Z5L9 587 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 MSANTD4Q8NCY6 345 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 ELMO3Q96BJ8 720 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 MS4A14Q96JA4 679 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 ALS2CR12Q96Q35 445 aa11.54□□□□□ -0.56
TPM1-210ENST00000558264 METTL14Q9HCE5 456 aaKnown RBP11.54□□□□□ -0.56
TPM1-210ENST00000558264 ZCCHC17Q9NP64 241 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms