RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 STYK1Q6J9G0 422 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-222ENST00000555774 ARL8AQ96BM9 186 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 STK33Q9BYT3 514 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 ARHGEF10LQ9HCE6 1279 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 HERC5Q9UII4 1024 aaKnown RBP14.71□□□□□ -0.05
SHMT2-222ENST00000555774 NCANO14594 1321 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 GRIN2DO15399 1336 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 SLITRK3O94933 977 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 TRIM37O94972 964 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 RFX1P22670 979 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 SOX5P35711 763 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 MAGEA9P43362 315 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 GNGT1P63211 74 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 MYBPC2Q14324 1141 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 LRCH2Q5VUJ6 765 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 KDM7AQ6ZMT4 941 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 HS2ST1Q7LGA3 356 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 PEX26Q7Z412 305 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 MYCT1Q8N699 235 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 WDR11Q9BZH6 1224 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 SLITRK6Q9H5Y7 841 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 RGL1Q9NZL6 768 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 DIS3Q9Y2L1 958 aaKnown RBP14.71□□□□□ -0.05
SHMT2-222ENST00000555774 PCDHB13Q9Y5F0 798 aa14.71□□□□□ -0.05
SHMT2-222ENST00000555774 GCOM1H8Y6P7 765 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-222ENST00000555774 DDX3XO00571 662 aaKnown RBP eCLIP14.7□□□□□ -0.061e-14■■□□□ 13.5
SHMT2-222ENST00000555774 CLIC2O15247 247 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 CEP104O60308 925 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 FAM153BP0C7A2 387 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 POLR2MP0CAP2 368 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 FAM153CQ494X1 144 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 KRT27Q7Z3Y8 459 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 COL23A1Q86Y22 540 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-222ENST00000555774 SLC30A5Q8TAD4 765 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 CYP2W1Q8TAV3 490 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 LRRC45Q96CN5 670 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 DYDC2Q96IM9 177 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 NACC1Q96RE7 527 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 WDR18Q9BV38 432 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 DMAC2Q9NW81 257 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 FAM153AQ9UHL3 310 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 TTC7AQ9ULT0 858 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-222ENST00000555774 ESYT3A0FGR9 886 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 HMGB1P1B2RPK0 211 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-222ENST00000555774 TMEM253P0C7T8 217 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 FMO5P49326 533 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 SETQ01105 290 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-222ENST00000555774 CTTNQ14247 550 aaKnown RBP14.7□□□□□ -0.06
SHMT2-222ENST00000555774 CC2D2BQ6DHV5 1058 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 KLHL7Q8IXQ5 586 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 C10orf67Q8IYJ2 551 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 PIK3R5Q8WYR1 880 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 VTI1AQ96AJ9 217 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 GOPCQ9HD26 462 aa14.7□□□□□ -0.06
SHMT2-222ENST00000555774 AJAP1Q9UKB5 411 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-222ENST00000555774 ZSCAN5CA6NGD5 496 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-222ENST00000555774 ZNF233A6NK53 670 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 F8VZ95 297 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 ZEB2O60315 1214 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 ZNF720Q7Z2F6 126 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 SLC9A9Q8IVB4 645 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 TPH2Q8IWU9 490 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 METTL13Q8N6R0 699 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 NEK9Q8TD19 979 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 ZNF622Q969S3 477 aaKnown RBP eCLIP14.69□□□□□ -0.06
SHMT2-222ENST00000555774 FRMD4BQ9Y2L6 1034 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 MRPL11Q9Y3B7 192 aaKnown RBP14.69□□□□□ -0.06
SHMT2-222ENST00000555774 NOC2LQ9Y3T9 749 aaKnown RBP14.69□□□□□ -0.06
SHMT2-222ENST00000555774 A0A1W2PRG0 241 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 SRRM3A6NNA2 597 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-222ENST00000555774 EBAG9O00559 213 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 EVI5O60447 810 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 PLA2G6O60733 806 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 MMP10P09238 476 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 GUCY2CP25092 1073 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 NMT1P30419 496 aaKnown RBP14.69□□□□□ -0.06
SHMT2-222ENST00000555774 ERVK-9P63128 1117 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 JAG1P78504 1218 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 KCNA1Q09470 495 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 CLUL1Q15846 466 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 EFCAB13Q8IY85 973 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 PIGOQ8TEQ8 1089 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 U2AF1L4Q8WU68 220 aaKnown RBP14.69□□□□□ -0.06
SHMT2-222ENST00000555774 RFFLQ8WZ73 363 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 HES6Q96HZ4 224 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 FIZ1Q96SL8 496 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 RANBP17Q9H2T7 1088 aaKnown RBP14.69□□□□□ -0.06
SHMT2-222ENST00000555774 TMX2Q9Y320 296 aa14.69□□□□□ -0.06
SHMT2-222ENST00000555774 TMCO5BA8MYB1 307 aa14.68□□□□□ -0.06
SHMT2-222ENST00000555774 TRIM66O15016 1216 aa14.68□□□□□ -0.06
SHMT2-222ENST00000555774 GAS7O60861 476 aa14.68□□□□□ -0.06
SHMT2-222ENST00000555774 GUCY2FP51841 1108 aa14.68□□□□□ -0.06
SHMT2-222ENST00000555774 PPP2R5EQ16537 467 aa14.68□□□□□ -0.06
SHMT2-222ENST00000555774 NT5DC3Q86UY8 548 aa14.68□□□□□ -0.06
SHMT2-222ENST00000555774 FAM178BQ8IXR5 827 aa14.68□□□□□ -0.06
SHMT2-222ENST00000555774 CCDC26Q8TAB7 109 aa14.68□□□□□ -0.06
SHMT2-222ENST00000555774 LNX1Q8TBB1 728 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-222ENST00000555774 CHURC1Q8WUH1 139 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms