RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 HSDL1Q3SXM5 330 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 MAMDC4Q6UXC1 1216 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 KSR1Q8IVT5 923 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 TC2NQ8N9U0 490 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 AFAP1L1Q8TED9 768 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 PCDHB13Q9Y5F0 798 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 PLXNB2O15031 1838 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 A0A1W2PQC6 194 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 OATP04181 439 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 TCF7P36402 384 aaPredicted RBP21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 MARSP56192 900 aaKnown RBP21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 INHBEP58166 350 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 TAF1CQ15572 869 aaPredicted RBP21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 TAPT1Q6NXT6 567 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 STXBP4Q6ZWJ1 553 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 C17orf53Q8N3J3 647 aaPredicted RBP21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 SCFD2Q8WU76 684 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 GPR20Q99678 358 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 IKZF4Q9H2S9 585 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 TMX1Q9H3N1 280 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 DIS3Q9Y2L1 958 aaKnown RBP21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 MCM3APO60318 1980 aa21.55■■□□□ 1.04
RBFOX1-215ENST00000553186 CALUO43852 315 aaPredicted RBP21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 DGAT1O75907 488 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 TXNP10599 105 aaKnown RBP21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 NR2F2P24468 414 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 CLCN1P35523 988 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 FAM102BQ5T8I3 360 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 KATNBL1Q9H079 304 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 XPNPEP1Q9NQW7 623 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 GNA14O95837 355 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 GYPCP04921 128 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 TPM2P07951 284 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 STAT5BP51692 787 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 RBL2Q08999 1139 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 TTLL4Q14679 1199 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 MAN2A1Q16706 1144 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 VWA3BQ502W6 1294 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 DPP9Q86TI2 863 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 COPS5Q92905 334 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 NIFKQ9BYG3 293 aaKnown RBP21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 ST6GALNAC4Q9H4F1 302 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 VTA1Q9NP79 307 aa21.54■■□□□ 1.04
RBFOX1-215ENST00000553186 PES1O00541 588 aaKnown RBP21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 CETN3O15182 167 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 SNAI1O95863 264 aaPredicted RBP21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 ADKP55263 362 aaKnown RBP21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 MAML3Q96JK9 1138 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 CEP89Q96ST8 783 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 NDST4Q9H3R1 872 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 SLC15A5A6NIM6 579 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 K7ENM7 598 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 NR3C1P04150 777 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 TBC1D8BQ0IIM8 1120 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 NFIL3Q16649 462 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 C17orf99Q6UX52 265 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 DHX37Q8IY37 1157 aaKnown RBP21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 SMC1BQ8NDV3 1235 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 CCDC102AQ96A19 550 aa21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.53■■□□□ 1.04
RBFOX1-215ENST00000553186 RBM47A0AV96 593 aaKnown RBP21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 TLR2O60603 784 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 LGR5O75473 907 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 NCKAP1LP55160 1127 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 PEX3P56589 373 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 SOX10P56693 466 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 ALCAMQ13740 583 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 MTERF2Q49AM1 385 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 FAM160B1Q5W0V3 765 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 TMEM139Q8IV31 216 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 TRIM59Q8IWR1 403 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 MCPH1Q8NEM0 835 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 KIFAP3Q92845 792 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 SPATA33Q96N06 139 aa21.52■■□□□ 1.04
RBFOX1-215ENST00000553186 FXR1P51114 621 aaKnown RBP eCLIP21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 GTF2BQ00403 316 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 CCDC40Q4G0X9 1142 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 MORN1Q5T089 497 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 PPFIBP1Q86W92 1011 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 NPLOC4Q8TAT6 608 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 ERGIC2Q96RQ1 377 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 NTPCRQ9BSD7 190 aaKnown RBP21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 C17orf75Q9HAS0 396 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 ATP6V0A4Q9HBG4 840 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 PLXNA1Q9UIW2 1896 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 AKR1B15C9JRZ8 316 aaPredicted RBP21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 NOP56O00567 594 aaKnown RBP21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 CLIC2O15247 247 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 CASP14P31944 242 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 NOLC1Q14978 699 aaKnown RBP eCLIP21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 TARBP2Q15633 366 aaKnown RBP21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 HAUS6Q7Z4H7 955 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 BSNDQ8WZ55 320 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 GBP3Q9H0R5 595 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 DHX33Q9H6R0 707 aaKnown RBP21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 SPTLC3Q9NUV7 552 aa21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 ABT1Q9ULW3 272 aaKnown RBP21.51■■□□□ 1.03
RBFOX1-215ENST00000553186 RNF225M0QZC1 329 aaPredicted RBP21.5■■□□□ 1.03
RBFOX1-215ENST00000553186 AKAP3O75969 853 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms