RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CBWD5Q5RIA9 395 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 RAVER2Q9HCJ3 691 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 WRAP73Q9P2S5 460 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 PTPN22Q9Y2R2 807 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 SSU72P8A0A1W2PR75 194 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 SHTN1A0MZ66 631 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 GALCP54803 685 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 EPC2Q52LR7 807 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 PALB2Q86YC2 1186 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 BBXQ8WY36 941 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 CTNNBL1Q8WYA6 563 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 SAAL1Q96ER3 474 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 ZNF341Q9BYN7 854 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 WDR11Q9BZH6 1224 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 H0YHG0 523 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 IPO5O00410 1097 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 DLATP10515 647 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 HARSP12081 509 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 SEC24CP53992 1094 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 DLG4P78352 724 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 PAK2Q13177 524 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 FAM102BQ5T8I3 360 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 STRIP1Q5VSL9 837 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 MIER3Q7Z3K6 550 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 METTL13Q8N6R0 699 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 DNAJC17Q9NVM6 304 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 PCDHA2Q9Y5H9 948 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 HGSO14964 777 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 TTI1O43156 1089 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 OPA1O60313 960 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 SLITRK3O94933 977 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 NPEPPSP55786 919 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 AP3B2Q13367 1082 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 MESDQ14696 234 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 PLA2G4FQ68DD2 849 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 LMBRD2Q68DH5 695 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 KAT5Q92993 513 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 SLC35C1Q96A29 364 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 LENG9Q96B70 501 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 BTBD6Q96KE9 485 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 TYW1Q9NV66 732 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 MYH1P12882 1939 aa14.88□□□□□ -0.03
PRPF40B-209ENST00000548825 NFIBO00712 420 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 SART1O43290 800 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 HIP1RO75146 1068 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 IVLP07476 585 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 CTNNA1P35221 906 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 PSMC2P35998 433 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 VPS41P49754 854 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 POP1Q99575 1024 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 GANQ9H2C0 597 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 RASSF4Q9H2L5 321 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 PLAAQ9Y263 795 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 ATP8A1Q9Y2Q0 1164 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 NOC2LQ9Y3T9 749 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 ASTN1O14525 1302 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 TARSL2A2RTX5 802 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 OPLAHO14841 1288 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 SLC16A4O15374 487 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 PEX3P56589 373 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 SLC27A3Q5K4L6 730 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 LDHDQ86WU2 507 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 GLG1Q92896 1179 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 KIAA1551Q9HCM1 1747 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 KIF4AO95239 1232 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 HNRNPH3P31942 346 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 CDK17Q00537 523 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 DHX9Q08211 1270 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 SPIRE1Q08AE8 756 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 ASTE1Q2TB18 679 aaPredicted RBP14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 TAX1BP1Q86VP1 789 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 MMGT1Q8N4V1 131 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 SLC20A1Q8WUM9 679 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 UNC45AQ9H3U1 944 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 PLCB1Q9NQ66 1216 aa14.87□□□□□ -0.03
PRPF40B-209ENST00000548825 DDX3XO00571 662 aaKnown RBP eCLIP14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 BTAF1O14981 1849 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 FOSP01100 380 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 SREBF1P36956 1147 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 MYL7Q01449 175 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 MAP2K1Q02750 393 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 NBPF9Q3BBW0 867 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 CEP55Q53EZ4 464 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 IRF2BP2Q7Z5L9 587 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 IL31RAQ8NI17 732 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 AENQ8WTP8 325 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 NAP1L4Q99733 375 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 CBWD1Q9BRT8 395 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 GLT8D2Q9H1C3 349 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 NUCKS1Q9H1E3 243 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 RBAK-RBAKDNI3L0D1 243 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 TGFB1I1O43294 461 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 BUB1BO60566 1050 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 SLCO1A2P46721 670 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 IRAK1P51617 712 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 TTMPQ5BVD1 217 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 SRLQ86TD4 932 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 THAP2Q9H0W7 228 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 NR2E1Q9Y466 385 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 YDJCA8MPS7 323 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms