RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 LETM2Q2VYF4 491 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 LEXMQ3ZCV2 418 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 TCEAL5Q5H9L2 206 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 NEK8Q86SG6 692 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 CRIPAKQ8N1N5 446 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 P2RX5Q93086 422 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 FAM20AQ96MK3 541 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 SCLT1Q96NL6 688 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 OSMRQ99650 979 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 JPH2Q9BR39 696 aaPredicted RBP10.54□□□□□ -0.72
YBX3-218ENST00000546298 PHF20Q9BVI0 1012 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 NIFKQ9BYG3 293 aaKnown RBP10.54□□□□□ -0.72
YBX3-218ENST00000546298 TMX1Q9H3N1 280 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 ATP6V0A4Q9HBG4 840 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 AAASQ9NRG9 546 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 ORC3Q9UBD5 711 aaPredicted RBP10.54□□□□□ -0.72
YBX3-218ENST00000546298 KCNJ14Q9UNX9 436 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 FAM50BQ9Y247 325 aa10.54□□□□□ -0.72
YBX3-218ENST00000546298 C9IYK1 514 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 TBX3O15119 743 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 HOXA2O43364 376 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 GPR32O75388 356 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 LINC00271P0C7V0 271 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 IBSPP21815 317 aaPredicted RBP10.53□□□□□ -0.72
YBX3-218ENST00000546298 EIF4BP23588 611 aaKnown RBP10.53□□□□□ -0.72
YBX3-218ENST00000546298 DNM2P50570 870 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 PSMC5P62195 406 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 FAM189BP81408 668 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 PPP4R3AQ6IN85 833 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 B3GNT9Q6UX72 402 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 EP400NLQ6ZTU2 488 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 EXOC8Q8IYI6 725 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 LINC01465Q8N7H1 131 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 TMEM40Q8WWA1 233 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 PABPC5Q96DU9 382 aaKnown RBP10.53□□□□□ -0.72
YBX3-218ENST00000546298 PPP1R16BQ96T49 567 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 ADAMTS10Q9H324 1103 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 ELAC1Q9H777 363 aaKnown RBP10.53□□□□□ -0.72
YBX3-218ENST00000546298 TMEM161AQ9NX61 479 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 PLAGL2Q9UPG8 496 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 PCDHB12Q9Y5F1 795 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 MRPL42Q9Y6G3 142 aaKnown RBP10.53□□□□□ -0.72
YBX3-218ENST00000546298 TTC28Q96AY4 2481 aa10.53□□□□□ -0.72
YBX3-218ENST00000546298 TBKBP1A7MCY6 615 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 DDX11L8A8MPP1 907 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 GRM6O15303 877 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 MGEA5O60502 916 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.73
YBX3-218ENST00000546298 MMP1P03956 469 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 DARSP14868 501 aaKnown RBP10.52□□□□□ -0.73
YBX3-218ENST00000546298 DSC3Q14574 896 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 TARBP2Q15633 366 aaKnown RBP10.52□□□□□ -0.73
YBX3-218ENST00000546298 UGCGQ16739 394 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 MTERF2Q49AM1 385 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 PAN2Q504Q3 1202 aaKnown RBP10.52□□□□□ -0.73
YBX3-218ENST00000546298 SPOUT1Q5T280 376 aaKnown RBP10.52□□□□□ -0.73
YBX3-218ENST00000546298 PIK3AP1Q6ZUJ8 805 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 FAM228AQ86W67 206 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 LRRC71Q8N4P6 559 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 ETNPPLQ8TBG4 499 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 NLRP7Q8WX94 980 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 GJA10Q969M2 543 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 NECAB3Q96P71 396 aaPredicted RBP10.52□□□□□ -0.73
YBX3-218ENST00000546298 GCOM2Q9BZD3 368 aaPredicted RBP10.52□□□□□ -0.73
YBX3-218ENST00000546298 INO80BQ9C086 356 aaPredicted RBP10.52□□□□□ -0.73
YBX3-218ENST00000546298 SEPT9Q9UHD8 586 aaPredicted RBP10.52□□□□□ -0.73
YBX3-218ENST00000546298 PPME1Q9Y570 386 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 COL4A6Q14031 1691 aa10.52□□□□□ -0.73
YBX3-218ENST00000546298 CCNT1O60563 726 aaKnown RBP10.51□□□□□ -0.73
YBX3-218ENST00000546298 ITGB1P05556 798 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 KRT2P35908 639 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 QARSP47897 775 aaKnown RBP10.51□□□□□ -0.73
YBX3-218ENST00000546298 GPC3P51654 580 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 NEK4P51957 841 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 UBE3AQ05086 875 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 PPP2R5CQ13362 524 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 TRIM29Q14134 588 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 COL19A1Q14993 1142 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 PTCRAQ6ISU1 281 aaPredicted RBP10.51□□□□□ -0.73
YBX3-218ENST00000546298 SLFN12Q8IYM2 578 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 ABI1Q8IZP0 508 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 KLHL23Q8NBE8 558 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 SPPL3Q8TCT6 385 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 NEK9Q8TD19 979 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 GTF3C6Q969F1 213 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 C1QTNF1Q9BXJ1 281 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 TMEM117Q9H0C3 514 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 ALG13Q9NP73 1137 aaKnown RBP10.51□□□□□ -0.73
YBX3-218ENST00000546298 KCNMB3Q9NPA1 279 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 CHST12Q9NRB3 414 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 CLDND1Q9NY35 253 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 DACT1Q9NYF0 836 aa10.51□□□□□ -0.73
YBX3-218ENST00000546298 IGKV6-21A0A0C4DH24 114 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 SLC37A4O43826 429 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 MAFO75444 373 aaPredicted RBP10.5□□□□□ -0.73
YBX3-218ENST00000546298 STBD1O95210 358 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 CTDNEP1O95476 244 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 EOMESO95936 686 aa10.5□□□□□ -0.73
YBX3-218ENST00000546298 P4HBP07237 508 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms