RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 KCTD1Q719H9 257 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 CATSPER3Q86XQ3 398 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SIAH1Q8IUQ4 282 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 CD302Q8IX05 232 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 IFT20Q8IY31 132 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 IQCKQ8N0W5 287 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 SYT2Q8N9I0 419 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ZNF784Q8NCA9 323 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 C1orf131Q8NDD1 294 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 TBC1D5Q92609 795 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 LENG9Q96B70 501 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ZBTB9Q96C00 473 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 MS4A14Q96JA4 679 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 MRIQ9BWK5 157 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 ANO3Q9BYT9 981 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 TANGO6Q9C0B7 1094 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 GOLGA6AQ9NYA3 693 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 NYAP2Q9P242 653 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 FBXL5Q9UKA1 691 aa5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 BZW2Q9Y6E2 419 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-212ENST00000542495 A6NNZ2 444 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L15C9J2P7 530 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L13C9JLJ4 530 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L11C9JVI0 530 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L18D6R9N7 530 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L22D6RA61 530 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L17D6RBQ6 530 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L19D6RCP7 530 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L20D6RJB6 530 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 PDXKO00764 312 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 MARCH6O60337 910 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 SSBP05455 408 aaKnown RBP eCLIP5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 HLA-DOAP06340 250 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 GLI1P08151 1106 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 ERCC3P19447 782 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 RPA1P27694 616 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 CIITAP33076 1130 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 SREBF1P36956 1147 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 STAT3P40763 770 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 CASP5P51878 434 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 CORO7P57737 925 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 KLHL30Q0D2K2 578 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L24Q0WX57 530 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 NR6A1Q15406 480 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 CDC37Q16543 378 aaPredicted RBP5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 NFIL3Q16649 462 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 KNOP1Q1ED39 458 aaKnown RBP5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 KIAA0753Q2KHM9 967 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 TUBB8Q3ZCM7 444 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 TTMPQ5BVD1 217 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 TATDN1Q6P1N9 297 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 USP17L6PQ6QN14 398 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 NELFCDQ8IXH7 590 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 LRRC57Q8N9N7 239 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 PIK3R5Q8WYR1 880 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM20AQ96MK3 541 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 TRERF1Q96PN7 1200 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 PSMB7Q99436 277 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 MXD3Q9BW11 206 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 PACSIN1Q9BY11 444 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 RASSF4Q9H2L5 321 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 TBC1D7Q9P0N9 293 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 HDAC9Q9UKV0 1011 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 GNEQ9Y223 722 aaKnown RBP5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 PCDHA1Q9Y5I3 950 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 GRIN2DO15399 1336 aa5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 ZNF646O15015 1829 aaPredicted RBP5.69□□□□□ -1.5
ATPAF1-212ENST00000542495 A0A0A6YYK5 440 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 GTPBP10A4D1E9 387 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 EIF3HO15372 352 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 SLC16A3O15427 465 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 HSF2BPO75031 334 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 FTCDO95954 541 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 FOSP01100 380 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 AFPP02771 609 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 CYP3A4P08684 503 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 EEF2P13639 858 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 UCHL3P15374 230 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 NR2F2P24468 414 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 HMGB2P26583 209 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 PON1P27169 355 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 POLD1P28340 1107 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 HSPA9P38646 679 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 MATR3P43243 847 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 MAGEA9P43362 315 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 CARSP49589 748 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 JAM2P57087 298 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 PSMC6P62333 389 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 MRPS25P82663 173 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ARHGAP4P98171 946 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 PTK2Q05397 1052 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 NFIAQ12857 509 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 PAK2Q13177 524 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 RAPGEF1Q13905 1077 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 EPHA7Q15375 998 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 SWT1Q5T5J6 900 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 SLFN13Q68D06 897 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ZNF571Q7Z3V5 609 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 SLFN11Q7Z7L1 901 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms