RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 VPS54Q9P1Q0 977 aa11.85□□□□□ -0.51
DDX11-213ENST00000539049 A6NJR5 290 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 ADAMTS2O95450 1211 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 MYCLP1P12525 358 aaPredicted RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 GM2AP17900 193 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 CYLC2Q14093 348 aaPredicted RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 KRT72Q14CN4 511 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 R3HDM1Q15032 1099 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 WDR59Q6PJI9 974 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 KLHL7Q8IXQ5 586 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 KRI1Q8N9T8 703 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 ATXN2LQ8WWM7 1075 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 DDX12PQ92771 950 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 NMD3Q96D46 503 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 DNAJC1Q96KC8 554 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.512e-6■■■■□ 22.1
DDX11-213ENST00000539049 MTFR1LQ9H019 292 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 DCLRE1BQ9H816 532 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 TDRKHQ9Y2W6 561 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 PCDH11XQ9BZA7 1347 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 NUTM2BA6NNL0 878 aaPredicted RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 NUTM2EB1AL46 878 aaPredicted RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 LMNAP02545 664 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 GSTT2P0CG29 244 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 GSTT2BP0CG30 244 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 GUCY1A2P33402 732 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 TNNC1P63316 161 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 PTPAQ15257 358 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 FITM2Q8N6M3 262 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDX11-213ENST00000539049 TTC8Q8TAM2 541 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 CTNND2Q9UQB3 1225 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 NFAT5O94916 1531 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 BIRC5O15392 142 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 UNC5CO95185 931 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 LYNP07948 512 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 PUS10Q3MIT2 529 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 TRIM67Q6ZTA4 783 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 DIS3L2Q8IYB7 885 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 TRIM22Q8IYM9 498 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 AGGF1Q8N302 714 aaeCLIP11.84□□□□□ -0.51
DDX11-213ENST00000539049 RBM46Q8TBY0 533 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 USP33Q8TEY7 942 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 CASP10Q92851 521 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 TUBGCP5Q96RT8 1024 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 CCDC28BQ9BUN5 200 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 DRC3Q9H069 523 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 VAT1LQ9HCJ6 419 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 FGFR1OP2Q9NVK5 253 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 LIMA1Q9UHB6 759 aaKnown RBP11.84□□□□□ -0.51
DDX11-213ENST00000539049 ARL2BPQ9Y2Y0 163 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 SLC4A4Q9Y6R1 1079 aa11.84□□□□□ -0.51
DDX11-213ENST00000539049 NCAPD2Q15021 1401 aa11.83□□□□□ -0.51
DDX11-213ENST00000539049 RGPD2P0DJD1 1756 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 LMO7Q8WWI1 1683 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 KDM4FA0A1W2PPD8 638 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 RAD51CO43502 376 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 ENTPD5O75356 428 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 PDE5AO76074 875 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 SKIV2L2P42285 1042 aaKnown RBP11.83□□□□□ -0.52
DDX11-213ENST00000539049 RFX5P48382 616 aaPredicted RBP11.83□□□□□ -0.52
DDX11-213ENST00000539049 PMS2P54278 862 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 RNASE9P60153 205 aaKnown RBP11.83□□□□□ -0.52
DDX11-213ENST00000539049 OCRLQ01968 901 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 PARP6Q2NL67 630 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 ZNF362Q5T0B9 420 aaPredicted RBP11.83□□□□□ -0.52
DDX11-213ENST00000539049 MARK2Q7KZI7 788 aaKnown RBP11.83□□□□□ -0.52
DDX11-213ENST00000539049 TMCO5AQ8N6Q1 288 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 FBXO41Q8TF61 875 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
DDX11-213ENST00000539049 ISCUQ9H1K1 167 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 RNF14Q9UBS8 474 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 TLDC2A0PJX2 215 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 CCNB1P14635 433 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
DDX11-213ENST00000539049 CUL1Q13616 776 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 HLFQ16534 295 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 GSTA3Q16772 222 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 PLBD2Q8NHP8 589 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 UHMK1Q8TAS1 419 aaKnown RBP11.83□□□□□ -0.52
DDX11-213ENST00000539049 MAML3Q96JK9 1138 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 CCDC42Q96M95 316 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 MYH10P35580 1976 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 TMEM110-MUSTN1A8MSY1 372 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 O00370 1275 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 NAT2P11245 290 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 CYB5R4Q7L1T6 521 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 ST13P4Q8IZP2 240 aaPredicted RBP11.83□□□□□ -0.52
DDX11-213ENST00000539049 CEP70Q8NHQ1 597 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDX11-213ENST00000539049 TLCD1Q96CP7 247 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 CCDC113Q9H0I3 377 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 SH2D4AQ9H788 454 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
DDX11-213ENST00000539049 ARHGAP23Q9P227 1491 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms