RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ODR4Q5SWX8 454 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 FAM117BQ6P1L5 589 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 SPRED2Q7Z698 418 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 C4orf19Q8IY42 314 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 FAM184AQ8NB25 1140 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 SLC17A8Q8NDX2 589 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 TMX3Q96JJ7 454 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 TGS1Q96RS0 853 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 MAP7D2Q96T17 732 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 ADAMTS10Q9H324 1103 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 ERVK-5Q9HDB9 667 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 SEPT9Q9UHD8 586 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 PCDHA12Q9UN75 941 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 NOC2LQ9Y3T9 749 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 PPME1Q9Y570 386 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 VCANP13611 3396 aa19.31■□□□□ 0.68
SFSWAP-205ENST00000537164 NEMFO60524 1076 aa19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 MAFO75444 373 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 RPS6KA5O75582 802 aa19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 VTNP04004 478 aa19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 U2AF2P26368 475 aaKnown RBP eCLIP19.3■□□□□ 0.689e-7■■■■□ 19.6
SFSWAP-205ENST00000537164 CALCRLQ16602 461 aa19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 KIZQ2M2Z5 673 aa19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 LRRC71Q8N4P6 559 aa19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 TMX1Q9H3N1 280 aa19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 WRAP73Q9P2S5 460 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 PRRC2BQ5JSZ5 2229 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-205ENST00000537164 TMEM150BA6NC51 233 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 GPR182O15218 404 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 MARCH6O60337 910 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 LPXNO60711 386 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 UPP2O95045 317 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 NLRP11P59045 1033 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 CDC42EP1Q00587 391 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 MTERF2Q49AM1 385 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 NOSTRINQ8IVI9 506 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 ARNTL2Q8WYA1 636 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 ZNF689Q96CS4 500 aaPredicted RBP19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 YME1L1Q96TA2 773 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 HSD17B14Q9BPX1 270 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 CERS4Q9HA82 394 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 AKT3Q9Y243 479 aa19.29■□□□□ 0.68
SFSWAP-205ENST00000537164 SPTBN5Q9NRC6 3674 aaKnown RBP19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 DDX11L8A8MPP1 907 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 LYPLA2O95372 231 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 TRAPPC10P48553 1259 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 GPC3P51654 580 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 TMEM266Q2M3C6 531 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 FAM228AQ86W67 206 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 SAMD11Q96NU1 681 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 OSMRQ99650 979 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 LXNQ9BS40 222 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 BACH2Q9BYV9 841 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 ZSWIM4Q9H7M6 989 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 TTC12Q9H892 705 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 SUGCTQ9HAC7 445 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 CYP26B1Q9NR63 512 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 LMCD1Q9NZU5 365 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 ST3GAL5Q9UNP4 418 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 GINS2Q9Y248 185 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 KIF3AQ9Y496 699 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 MTCH2Q9Y6C9 303 aa19.28■□□□□ 0.68
SFSWAP-205ENST00000537164 RFXAPO00287 272 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 DGKIO75912 1065 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 SLITRK3O94933 977 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 IGFBP4P22692 258 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 EIF4BP23588 611 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 NCAPH2Q6IBW4 605 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 NPAS4Q8IUM7 802 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 EXOC8Q8IYI6 725 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 NEK9Q8TD19 979 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 JPH2Q9BR39 696 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 TMEM60Q9H2L4 133 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 DHX33Q9H6R0 707 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 RGS18Q9NS28 235 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 RGL1Q9NZL6 768 aa19.27■□□□□ 0.68
SFSWAP-205ENST00000537164 CUL9Q8IWT3 2517 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 MGEA5O60502 916 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 LINC00271P0C7V0 271 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 YWHABP31946 246 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 TXKP42681 527 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 DNM2P50570 870 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 NFX1Q12986 1120 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 GRB10Q13322 594 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 DRP2Q13474 957 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 DSC3Q14574 896 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 DYDC2Q96IM9 177 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 EIF2AK1Q9BQI3 630 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 SH2D3AQ9BRG2 576 aa19.26■□□□□ 0.67
SFSWAP-205ENST00000537164 ADGRA3Q8IWK6 1321 aa19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 FNDC1Q4ZHG4 1894 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 STAG3L1P0CL83 205 aa19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 DARSP14868 501 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 MCM7P33993 719 aa19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 SARSP49591 514 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 NPEPPSP55786 919 aa19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 PLA2G4FQ68DD2 849 aa19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 OTUD6AQ7L8S5 288 aa19.25■□□□□ 0.67
SFSWAP-205ENST00000537164 ZNF579Q8NAF0 562 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms