RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 ZNF233A6NK53 670 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 PDE2AO00408 941 aaPredicted RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 KRIT1O00522 736 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 SLC16A3O15427 465 aaKnown RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 RGS16O15492 202 aaPredicted RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 MAP3K13O43283 966 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 MARCH6O60337 910 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 PPFIA2O75334 1257 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 RAD17O75943 681 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 MOCS3O95396 460 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 KRT14P02533 472 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 H2AFZP0C0S5 128 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 ALDH3A1P30838 453 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 HSD17B3P37058 310 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 MATR3P43243 847 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHD4-206ENST00000536999 SCTRP47872 440 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 TM4SF4P48230 202 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 PSEN1P49768 467 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 CCNG1P51959 295 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 CLNS1AP54105 237 aaKnown RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 FKBP1BP68106 108 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 RASGRF1Q13972 1273 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 ZNF268Q14587 947 aaPredicted RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 GRM4Q14833 912 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 SETDB1Q15047 1291 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 NBPF20Q3BBV1 942 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 TTMPQ5BVD1 217 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 CMPK2Q5EBM0 449 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 MIIPQ5JXC2 388 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 FAM83BQ5T0W9 1011 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 ERMARDQ5T6L9 678 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 PPP1R2P3Q6NXS1 205 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 CLEC4GQ6UXB4 293 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 TPTE2Q6XPS3 522 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 PPP1R21Q6ZMI0 780 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 H2AFVQ71UI9 128 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 TRMT10CQ7L0Y3 403 aaKnown RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 SAMD7Q7Z3H4 446 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 PEX26Q7Z412 305 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 APBB1IPQ7Z5R6 666 aaPredicted RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 RAB11FIP4Q86YS3 637 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 RHOT2Q8IXI1 618 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 LMNTD2Q8IXW0 634 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 SMYD4Q8IYR2 804 aaPredicted RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 RASGEF1CQ8N431 466 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 CCDC82Q8N4S0 544 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 NEK9Q8TD19 979 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 FBF1Q8TES7 1133 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 SMCR8Q8TEV9 937 aaPredicted RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 LARP4BQ92615 738 aaKnown RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 HVCN1Q96D96 273 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 SAAL1Q96ER3 474 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 CDCA5Q96FF9 252 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 FAM81BQ96LP2 452 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 KRT12Q99456 494 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 CCDC28BQ9BUN5 200 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 HTATIP2Q9BUP3 242 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 CFHR5Q9BXR6 569 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 VCXQ9H320 206 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 PABPC3Q9H361 631 aaKnown RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 CENPHQ9H3R5 247 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 R3HDMLQ9H3Y0 253 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 EPB41L4AQ9HCS5 686 aaPredicted RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 PPANQ9NQ55 473 aaKnown RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 RBM12Q9NTZ6 932 aaKnown RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 MTMR10Q9NXD2 777 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 DDX20Q9UHI6 824 aaKnown RBP6.32□□□□□ -1.4
CHD4-206ENST00000536999 GDAQ9Y2T3 454 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 RIC1Q4ADV7 1423 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 SNED1Q8TER0 1413 aa6.32□□□□□ -1.4
CHD4-206ENST00000536999 ZNF804BA4D1E1 1349 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 SYNGAP1Q96PV0 1343 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 MYH7P12883 1935 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 TMEM265A0A087WTH1 108 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 WTIPA6NIX2 430 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 LRRC53A6NM62 1247 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 M0R2N6 131 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 STXBP3O00186 592 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 KCNK3O14649 394 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 GALR2O43603 387 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 HIP1RO75146 1068 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 PALMO75781 387 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CAMTA2O94983 1202 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 ALDH1A1P00352 501 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CHGBP05060 677 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 PLCG1P19174 1290 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CHRNA3P32297 505 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CARSP49589 748 aaKnown RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 HADHBP55084 474 aaKnown RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 GUCY1A3Q02108 690 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CYP27A1Q02318 531 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CCDC15Q0P6D6 951 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 TTLL12Q14166 644 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 MYBPC2Q14324 1141 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 TCEAL1Q15170 157 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 PPP1R7Q15435 360 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CALCRLQ16602 461 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 KRT71Q3SY84 523 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 RBM26Q5T8P6 1007 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms