RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 USO1O60763 962 aaKnown RBP15.66■□□□□ 0.1
VPS11-205ENST00000534551 CAND2O75155 1236 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 LYPLA2O95372 231 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 RPA1P27694 616 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 POLGP54098 1239 aaPredicted RBP15.66■□□□□ 0.1
VPS11-205ENST00000534551 LPIN1Q14693 890 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 EMC2Q15006 297 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 KIZQ2M2Z5 673 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 FAM26DQ5JW98 314 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 PSRC1Q6PGN9 363 aaPredicted RBP15.66■□□□□ 0.1
VPS11-205ENST00000534551 USP49Q70CQ1 688 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 RPAINQ86UA6 219 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 KSR1Q8IVT5 923 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 TNPO1Q92973 898 aaKnown RBP15.66■□□□□ 0.1
VPS11-205ENST00000534551 TMEM143Q96AN5 459 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 PNMA5Q96PV4 448 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 OSMRQ99650 979 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 POLR3CQ9BUI4 534 aaPredicted RBP15.66■□□□□ 0.1
VPS11-205ENST00000534551 AGO3Q9H9G7 860 aaKnown RBP15.66■□□□□ 0.1
VPS11-205ENST00000534551 XPNPEP1Q9NQW7 623 aa15.66■□□□□ 0.1
VPS11-205ENST00000534551 DDX19AQ9NUU7 478 aaKnown RBP15.66■□□□□ 0.1
VPS11-205ENST00000534551 SZT2Q5T011 3432 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 IGKV6-21A0A0C4DH24 114 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 DKC1O60832 514 aaKnown RBP eCLIP15.65■□□□□ 0.1
VPS11-205ENST00000534551 MAFO75444 373 aaPredicted RBP15.65■□□□□ 0.1
VPS11-205ENST00000534551 CXCL10P02778 98 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 RFC2P35250 354 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 NASPP49321 788 aaPredicted RBP15.65■□□□□ 0.1
VPS11-205ENST00000534551 DNM1Q05193 864 aaKnown RBP15.65■□□□□ 0.1
VPS11-205ENST00000534551 GRB10Q13322 594 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 FBXO47Q5MNV8 452 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 ARL6IP4Q66PJ3 421 aaKnown RBP15.65■□□□□ 0.1
VPS11-205ENST00000534551 TMCO2Q7Z6W1 182 aaPredicted RBP15.65■□□□□ 0.1
VPS11-205ENST00000534551 RSPH3Q86UC2 560 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 DBF4BQ8NFT6 615 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 CSRNP2Q9H175 543 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 DHX33Q9H6R0 707 aaKnown RBP15.65■□□□□ 0.1
VPS11-205ENST00000534551 KIAA1024Q9UPX6 916 aa15.65■□□□□ 0.1
VPS11-205ENST00000534551 ZBBXA8MT70 800 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 E9PMD0 336 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 MAGEB2O15479 319 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 GPR32O75388 356 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 BMP15O95972 392 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 CD52P31358 61 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 DDIT3P35638 169 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 STK38Q15208 465 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 PLEKHG4Q58EX7 1191 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 HABP4Q5JVS0 413 aaKnown RBP15.64■□□□□ 0.09
VPS11-205ENST00000534551 KRT79Q5XKE5 535 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 MAEAQ7L5Y9 396 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 CABP7Q86V35 215 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 CCDC43Q96MW1 224 aaKnown RBP15.64■□□□□ 0.09
VPS11-205ENST00000534551 MAP7D2Q96T17 732 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 CELF4Q9BZC1 486 aaKnown RBP15.64■□□□□ 0.09
VPS11-205ENST00000534551 RAB34Q9BZG1 259 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 GPRC5CQ9NQ84 441 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 KIAA1671Q9BY89 1806 aa15.64■□□□□ 0.09
VPS11-205ENST00000534551 GRXCR1A8MXD5 290 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 M0QZ92 97 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 CSDE1O75534 798 aaKnown RBP15.63■□□□□ 0.09
VPS11-205ENST00000534551 FGBP02675 491 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 PFKMP08237 780 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 FGFR4P22455 802 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 GPC3P51654 580 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 NLRP11P59045 1033 aaKnown RBP15.63■□□□□ 0.09
VPS11-205ENST00000534551 DEFB103AP81534 67 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 PDIA5Q14554 519 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 KARSQ15046 597 aaKnown RBP15.63■□□□□ 0.09
VPS11-205ENST00000534551 TMEM119Q4V9L6 283 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 RASIP1Q5U651 963 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 CNKSR3Q6P9H4 555 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 OTUD6AQ7L8S5 288 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 RPUSD2Q8IZ73 545 aaKnown RBP15.63■□□□□ 0.09
VPS11-205ENST00000534551 LINC00301Q8NCQ3 95 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 LINC01599Q8WXQ3 324 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 SLC7A3Q8WY07 619 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 HERVK_113Q902F9 699 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 LRCH3Q96II8 777 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 EPSTI1Q96J88 318 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 NLRP4Q96MN2 994 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 MTRQ99707 1265 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 IFIH1Q9BYX4 1025 aaKnown RBP15.63■□□□□ 0.09
VPS11-205ENST00000534551 BHMT2Q9H2M3 363 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 ADAMTS10Q9H324 1103 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 POLD4Q9HCU8 107 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 ANKEF1Q9NU02 776 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 SUCLA2Q9P2R7 463 aaPredicted RBP15.63■□□□□ 0.09
VPS11-205ENST00000534551 NOC2LQ9Y3T9 749 aaKnown RBP15.63■□□□□ 0.09
VPS11-205ENST00000534551 COL4A6Q14031 1691 aa15.63■□□□□ 0.09
VPS11-205ENST00000534551 CDH23Q9H251 3354 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 RFC5P40937 340 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 SLC39A14Q15043 492 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 IER5Q5VY09 327 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.62■□□□□ 0.09
VPS11-205ENST00000534551 TSHZ1Q6ZSZ6 1077 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 FAM228AQ86W67 206 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 RHPN2Q8IUC4 686 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 ASAP3Q8TDY4 903 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 SYMPKQ92797 1274 aaKnown RBP15.62■□□□□ 0.09
VPS11-205ENST00000534551 ZNF396Q96N95 335 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms