RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 NLRP11P59045 1033 aaKnown RBP14.68□□□□□ -0.06
CPSF1-204ENST00000529288 DLX2Q07687 328 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-204ENST00000529288 CPLX2Q6PUV4 134 aaKnown RBP14.68□□□□□ -0.06
CPSF1-204ENST00000529288 SLC24A5Q71RS6 500 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 RBM23Q86U06 439 aaKnown RBP14.68□□□□□ -0.06
CPSF1-204ENST00000529288 FAM228AQ86W67 206 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 RNF169Q8NCN4 708 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 PPP2R3CQ969Q6 453 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 LENG9Q96B70 501 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 FAM167AQ96KS9 214 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 UNC45AQ9H3U1 944 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 ATP6V0A4Q9HBG4 840 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 SH3GLB2Q9NR46 395 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 RGS18Q9NS28 235 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 C1orf112Q9NSG2 853 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 PDRG1Q9NUG6 133 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 PCDHA4Q9UN74 947 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 PCDHB12Q9Y5F1 795 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 GPR32O75388 356 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 DEXIO95424 95 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 TDP2O95551 362 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 FGFR1P11362 822 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 LTBRP36941 435 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 NDUFV1P49821 464 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 PRKCEQ02156 737 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 UGCGQ16739 394 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 NAALADL2Q58DX5 795 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 MIER3Q7Z3K6 550 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 ADGRD2Q7Z7M1 963 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 BLIDQ8IZY5 108 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 CRIPAKQ8N1N5 446 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 P2RX5Q93086 422 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 AIFM3Q96NN9 605 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 RIT2Q99578 217 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 AAASQ9NRG9 546 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-204ENST00000529288 PCDHGC5Q9Y5F6 944 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 COL4A6Q14031 1691 aa14.67□□□□□ -0.06
CPSF1-204ENST00000529288 PI4K2BG5E9Z4 385 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 EDIL3O43854 480 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 ZNF862O60290 1169 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 DTNBO60941 627 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 ZSCAN20P17040 1043 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-204ENST00000529288 FGFR4P22455 802 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 SFNP31947 248 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 NRIP1P48552 1158 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 JAK3P52333 1124 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 EVCP57679 992 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 CAMK1Q14012 370 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 MTERF2Q49AM1 385 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 THNSL1Q8IYQ7 743 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 NLRP7Q8WX94 980 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 SLC5A5Q92911 643 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 ZNF274Q96GC6 653 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-204ENST00000529288 C22orf23Q9BZE7 217 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 TYW1Q9NV66 732 aaKnown RBP14.66□□□□□ -0.06
CPSF1-204ENST00000529288 HCSTQ9UBK5 93 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 SEPT9Q9UHD8 586 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-204ENST00000529288 KCNJ14Q9UNX9 436 aa14.66□□□□□ -0.06
CPSF1-204ENST00000529288 DDX11L8A8MPP1 907 aa14.65□□□□□ -0.06
CPSF1-204ENST00000529288 C9IYK1 514 aa14.65□□□□□ -0.06
CPSF1-204ENST00000529288 TBC1D8BQ0IIM8 1120 aa14.65□□□□□ -0.06
CPSF1-204ENST00000529288 CTC1Q2NKJ3 1217 aa14.65□□□□□ -0.06
CPSF1-204ENST00000529288 SH2D3AQ9BRG2 576 aa14.65□□□□□ -0.06
CPSF1-204ENST00000529288 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-204ENST00000529288 TLE6Q9H808 572 aa14.65□□□□□ -0.06
CPSF1-204ENST00000529288 TMEM161AQ9NX61 479 aa14.65□□□□□ -0.06
CPSF1-204ENST00000529288 CD207Q9UJ71 328 aa14.65□□□□□ -0.06
CPSF1-204ENST00000529288 TMEM150BA6NC51 233 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 PER2O15055 1255 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 MBTPS2O43462 519 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 TBX10O75333 385 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 CSDE1O75534 798 aaKnown RBP14.64□□□□□ -0.07
CPSF1-204ENST00000529288 ADAM15Q13444 863 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 COL19A1Q14993 1142 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 NONOQ15233 471 aaKnown RBP eCLIP14.64□□□□□ -0.07
CPSF1-204ENST00000529288 CSPP1Q1MSJ5 1256 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 INF2Q27J81 1249 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 LETM2Q2VYF4 491 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 Q4G0T1 1027 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 ABI1Q8IZP0 508 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 COLGALT1Q8NBJ5 622 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 FAM122AQ96E09 287 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 TM6SF1Q9BZW5 370 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 ADAMTS10Q9H324 1103 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 DDX25Q9UHL0 483 aaKnown RBP14.64□□□□□ -0.07
CPSF1-204ENST00000529288 HCN4Q9Y3Q4 1203 aa14.64□□□□□ -0.07
CPSF1-204ENST00000529288 MARCH6O60337 910 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 GPR37L1O60883 481 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 PSMD10O75832 226 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 FGF18O76093 207 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 ALADP13716 330 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 EIF4BP23588 611 aaKnown RBP14.63□□□□□ -0.07
CPSF1-204ENST00000529288 GPC3P51654 580 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 FAM189BP81408 668 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 ZP2Q05996 745 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 DSC3Q14574 896 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 ADHFE1Q8IWW8 467 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 C11orf16Q9NQ32 467 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 BARX2Q9UMQ3 279 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms