RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 PLA2G12BQ9BX93 195 aa4.23□□□□□ -1.73
COPB1-205ENST00000526527 C12orf65Q9H3J6 166 aaKnown RBP4.23□□□□□ -1.73
COPB1-205ENST00000526527 ZNF703Q9H7S9 590 aaPredicted RBP4.23□□□□□ -1.73
COPB1-205ENST00000526527 NCOA5Q9HCD5 579 aaKnown RBP4.23□□□□□ -1.73
COPB1-205ENST00000526527 NR2E1Q9Y466 385 aa4.23□□□□□ -1.73
COPB1-205ENST00000526527 PPP1R12AO14974 1030 aaPredicted RBP4.22□□□□□ -1.73
COPB1-205ENST00000526527 ASMTLO95671 621 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 PTPN1P18031 435 aaKnown RBP4.22□□□□□ -1.73
COPB1-205ENST00000526527 ETV4P43268 484 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 SETQ01105 290 aaPredicted RBP4.22□□□□□ -1.73
COPB1-205ENST00000526527 NFYCQ13952 458 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 WDR72Q3MJ13 1102 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 YOD1Q5VVQ6 348 aaPredicted RBP4.22□□□□□ -1.73
COPB1-205ENST00000526527 EP400NLQ6ZTU2 488 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 LARP4Q71RC2 724 aaKnown RBP eCLIP4.22□□□□□ -1.73
COPB1-205ENST00000526527 LILRB2Q8N423 598 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 ZNF808Q8N4W9 903 aaPredicted RBP4.22□□□□□ -1.73
COPB1-205ENST00000526527 CFHR4Q92496 578 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 CLIP3Q96DZ5 547 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 SCYL1Q96KG9 808 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 RNPC3Q96LT9 517 aaKnown RBP4.22□□□□□ -1.73
COPB1-205ENST00000526527 ZDHHC5Q9C0B5 715 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 KIAA1683Q9H0B3 1180 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 RIC8BQ9NVN3 520 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 ARHGAP28Q9P2N2 729 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 NDOR1Q9UHB4 597 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 TRAF6Q9Y4K3 522 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 RB1CC1Q8TDY2 1594 aa4.22□□□□□ -1.73
COPB1-205ENST00000526527 FOXN1O15353 648 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 ARHGAP6O43182 974 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 NCLP19338 710 aaKnown RBP4.21□□□□□ -1.74
COPB1-205ENST00000526527 ADCY8P40145 1251 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 KCNQ1P51787 676 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 IL13RA1P78552 427 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 FOXL1Q12952 345 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 PLEKHG4Q58EX7 1191 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 TRIM61Q5EBN2 209 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 FAM209AQ5JX71 171 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 RNF187Q5TA31 235 aaPredicted RBP4.21□□□□□ -1.74
COPB1-205ENST00000526527 GIMAP6Q6P9H5 292 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 ARHGAP36Q6ZRI8 547 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 BHLHA9Q7RTU4 235 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 EXOC2Q96KP1 924 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 MAGEB10Q96LZ2 347 aaPredicted RBP4.21□□□□□ -1.74
COPB1-205ENST00000526527 TTPALQ9BTX7 342 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 INTS7Q9NVH2 962 aaKnown RBP4.21□□□□□ -1.74
COPB1-205ENST00000526527 SRPK3Q9UPE1 567 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 PRKAB1Q9Y478 270 aa4.21□□□□□ -1.74
COPB1-205ENST00000526527 MAN2B1O00754 1011 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 RFPL3O75679 317 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 NPTXRO95502 500 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 HMGCRP04035 888 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 MC4RP32245 332 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 ADRA1BP35368 520 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 MSX2P35548 267 aaPredicted RBP4.2□□□□□ -1.74
COPB1-205ENST00000526527 RPS19P39019 145 aaKnown RBP4.2□□□□□ -1.74
COPB1-205ENST00000526527 ST5P78524 1137 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 MRPS21P82921 87 aaKnown RBP4.2□□□□□ -1.74
COPB1-205ENST00000526527 GUCY1A3Q02108 690 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 PAK1Q13153 545 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 SQSTM1Q13501 440 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 GPR19Q15760 415 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 DDX53Q86TM3 631 aaKnown RBP4.2□□□□□ -1.74
COPB1-205ENST00000526527 ZC3H7AQ8IWR0 971 aaKnown RBP4.2□□□□□ -1.74
COPB1-205ENST00000526527 NLGN4XQ8N0W4 816 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 INCENPQ9NQS7 918 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 MAGEC2Q9UBF1 373 aaPredicted RBP4.2□□□□□ -1.74
COPB1-205ENST00000526527 PUF60Q9UHX1 559 aaKnown RBP4.2□□□□□ -1.74
COPB1-205ENST00000526527 CDC42EP3Q9UKI2 254 aa4.2□□□□□ -1.74
COPB1-205ENST00000526527 NACADO15069 1562 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 AMY2AP04746 511 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 PDE6AP16499 860 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 AMY2BP19961 511 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 PTGS1P23219 599 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 HIBADHP31937 336 aaKnown RBP4.19□□□□□ -1.74
COPB1-205ENST00000526527 IGFALSP35858 605 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 EIF4HQ15056 248 aaKnown RBP4.19□□□□□ -1.74
COPB1-205ENST00000526527 USP30Q70CQ3 517 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 UBE2R2Q712K3 238 aaPredicted RBP4.19□□□□□ -1.74
COPB1-205ENST00000526527 PTRH1Q86Y79 214 aaKnown RBP4.19□□□□□ -1.74
COPB1-205ENST00000526527 GPR135Q8IZ08 494 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 MFSD3Q96ES6 412 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 TLR9Q9NR96 1032 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 AURKAIP1Q9NWT8 199 aaPredicted RBP4.19□□□□□ -1.74
COPB1-205ENST00000526527 GALNT8Q9NY28 637 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 PLA2G3Q9NZ20 509 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 ATP23Q9Y6H3 246 aa4.19□□□□□ -1.74
COPB1-205ENST00000526527 SCRIBQ14160 1630 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 KCNQ2O43526 872 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 OPA1O60313 960 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 ASLP04424 464 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 KRT15P19012 456 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 AOAHP28039 575 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 PCOLCEQ15113 449 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 STILQ15468 1287 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 FIGNQ5HY92 759 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 FOXB2Q5VYV0 432 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 TRIM68Q6AZZ1 485 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 LAIR1Q6GTX8 287 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 CXXC5Q7LFL8 322 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms