RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 SMCR8Q8TEV9 937 aaPredicted RBP4.53□□□□□ -1.68
PVT1-211ENST00000521600 EDARADDQ8WWZ3 215 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 TTC9Q92623 222 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 TIFAQ96CG3 184 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 DDX11Q96FC9 970 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 C8orf76Q96K31 380 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 DRC1Q96MC2 740 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 FBXL18Q96ME1 805 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 TMEM74Q96NL1 305 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 SPON2Q9BUD6 331 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 LRRC2Q9BYS8 371 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 NAPBQ9H115 298 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 CLSTN2Q9H4D0 955 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 RNF41Q9H4P4 317 aaPredicted RBP4.53□□□□□ -1.68
PVT1-211ENST00000521600 PIH1D3Q9NQM4 214 aaKnown RBP4.53□□□□□ -1.68
PVT1-211ENST00000521600 TMEM39AQ9NV64 488 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 TMOD2Q9NZR1 351 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 ATP11BQ9Y2G3 1177 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 ZKSCAN5Q9Y2L8 839 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 PTPRZ1P23471 2315 aaPredicted RBP4.53□□□□□ -1.68
PVT1-211ENST00000521600 EPG5Q9HCE0 2579 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 FAM186AA6NE01 2351 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 CACNA1HO95180 2353 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 TECTAO75443 2155 aa4.53□□□□□ -1.68
PVT1-211ENST00000521600 PDS5AQ29RF7 1337 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 ZFHX2Q9C0A1 2572 aaPredicted RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 CCDC196A0A1B0GTZ2 297 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 M0R082 166 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 SH2B2O14492 632 aaPredicted RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 FOXP2O15409 715 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 ZNF500O60304 480 aaPredicted RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 KINO60870 393 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 CTDNEP1O95476 244 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 YEATS4O95619 227 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 B3GALT4O96024 378 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 PF4P02776 101 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 CHGBP05060 677 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 ESRRAP11474 423 aaPredicted RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 PCP11498 1178 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 EIF4A3P38919 411 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 LIFRP42702 1097 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 TDO2P48775 406 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 METAP2P50579 478 aaKnown RBP eCLIP4.52□□□□□ -1.69
PVT1-211ENST00000521600 HAND2P61296 217 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 CCT2P78371 535 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 FAM160A1Q05DH4 1040 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 PPP2R3AQ06190 1150 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 RASGRF1Q13972 1273 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 TRIM29Q14134 588 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 IKBKEQ14164 716 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 PPP2R5BQ15173 497 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 SF3A1Q15459 793 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 ZRSR1Q15695 479 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 PCNX4Q63HM2 1172 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 HGSNATQ68CP4 663 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 APOBEC3HQ6NTF7 200 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 GIMAP6Q6P9H5 292 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 NFXL1Q6ZNB6 911 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 C20orf204Q6ZNR8 217 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 RBM43Q6ZSC3 357 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 MFSD6Q6ZSS7 791 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 SGMS1Q86VZ5 419 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 VPS37DQ86XT2 251 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 IL22RA1Q8N6P7 574 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 MAGEB6Q8N7X4 407 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 SLC43A3Q8NBI5 491 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 PHC3Q8NDX5 983 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 TDRD7Q8NHU6 1098 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 ZNF417Q8TAU3 575 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 SLC7A3Q8WY07 619 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 USP6NLQ92738 828 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 RHOVQ96L33 236 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 STRBPQ96SI9 672 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 ZNF587Q96SQ5 575 aaPredicted RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 FUCA2Q9BTY2 467 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 TANGO6Q9C0B7 1094 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 DACT1Q9NYF0 836 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 RTEL1Q9NZ71 1219 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 FLRT1Q9NZU1 646 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 LRP2BPQ9P2M1 347 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 ORC3Q9UBD5 711 aaPredicted RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 PRKAG2Q9UGJ0 569 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 ADAMTS1Q9UHI8 967 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 USP25Q9UHP3 1055 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 RCOR1Q9UKL0 485 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 DENND2AQ9ULE3 1009 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 AGTPBP1Q9UPW5 1226 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 SLC45A1Q9Y2W3 748 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 AFG3L2Q9Y4W6 797 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 RIF1Q5UIP0 2472 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 ATG2AQ2TAZ0 1938 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 NID2Q14112 1375 aa4.52□□□□□ -1.69
PVT1-211ENST00000521600 MYO5AQ9Y4I1 1855 aaKnown RBP4.52□□□□□ -1.69
PVT1-211ENST00000521600 TPRP12270 2363 aaKnown RBP4.51□□□□□ -1.69
PVT1-211ENST00000521600 SCN5AQ14524 2016 aa4.51□□□□□ -1.69
PVT1-211ENST00000521600 ZNF236Q9UL36 1845 aa4.51□□□□□ -1.69
PVT1-211ENST00000521600 STK36Q9NRP7 1315 aa4.51□□□□□ -1.69
PVT1-211ENST00000521600 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.51□□□□□ -1.69
PVT1-211ENST00000521600 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.51□□□□□ -1.69
PVT1-211ENST00000521600 A0A1W2PQ27 194 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms