RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 TBX10O75333 385 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 TFPTP0C1Z6 253 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 EEF1GP26641 437 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 TECP42680 631 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 MMP13P45452 471 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 PSMD7P51665 324 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 FAM69CQ0P6D2 419 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 CBX3Q13185 183 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 GALNTL6Q49A17 601 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 FAM83BQ5T0W9 1011 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 AGBL2Q5U5Z8 902 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 LRIG3Q6UXM1 1119 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 TAB3Q8N5C8 712 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 EFCAB3Q8N7B9 438 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 TLCD1Q96CP7 247 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 HSPBAP1Q96EW2 488 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 CCDC87Q9NVE4 849 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 NCAPD2Q15021 1401 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 ZFYVE16Q7Z3T8 1539 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 A0A0G2JS52 829 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 TCRBV7S2A1N4TA0A589 114 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 NDUFB5O43674 189 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 BRAFP15056 766 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 PRLRP16471 622 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 PLCG1P19174 1290 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 MAGEA8P43361 318 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 FOXO4P98177 505 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 PTK2Q05397 1052 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 AUHQ13825 339 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 TTLL12Q14166 644 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 ITIH4Q14624 930 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 KYNUQ16719 465 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 TAF1BQ53T94 588 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 SFMBT2Q5VUG0 894 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 ASRGL1Q7L266 308 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 HS2ST1Q7LGA3 356 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 PHLDB2Q86SQ0 1253 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 IFNL3Q8IZI9 196 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 ASAP3Q8TDY4 903 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 U2AF1L4Q8WU68 220 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 BAP1Q92560 729 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 SMC6Q96SB8 1091 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 NT5C3AQ9H0P0 336 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 CUEDC2Q9H467 287 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 ZWILCHQ9H900 591 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 LIN28AQ9H9Z2 209 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 CPDO75976 1380 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 CEMIPQ8WUJ3 1361 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 ASXL2Q76L83 1435 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 LAMA4Q16363 1823 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 EYA2O00167 538 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 PGRMC1O00264 195 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 TRAF5O00463 557 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 GSTA1P08263 222 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 PHKA1P46020 1223 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 NAB2Q15742 525 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 SLC9C1Q4G0N8 1177 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 GIGYF2Q6Y7W6 1299 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ANKRD23Q86SG2 305 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 MTDHQ86UE4 582 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 FAM114A1Q8IWE2 563 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 TEX9Q8N6V9 391 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 NEK9Q8TD19 979 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 DDX17Q92841 729 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ZNF333Q96JL9 665 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 PLVAPQ9BX97 442 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 HSFX1Q9UBD0 423 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 PPP1R9AQ9ULJ8 1098 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 PHF24Q9UPV7 400 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 CHKBQ9Y259 395 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 SIK3Q9Y2K2 1263 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ARL2BPQ9Y2Y0 163 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 FLT4P35916 1363 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 WTIPA6NIX2 430 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ZBED4O75132 1171 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 CLSTN1O94985 981 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 TJP3O95049 919 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 UNC5CO95185 931 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ATP6V1B1P15313 513 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 SLC9A1P19634 815 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 DR1Q01658 176 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 THOC5Q13769 683 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 PABPC1LQ4VXU2 614 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ACSBG2Q5FVE4 666 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 RBBP8NLQ8NC74 664 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 KIAA0895Q8NCT3 520 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ATP8B4Q8TF62 1192 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 PRPF31Q8WWY3 499 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ESR2Q92731 530 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 USP6NLQ92738 828 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 FGFBP2Q9BYJ0 223 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 TRIM7Q9C029 511 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 IKZF4Q9H2S9 585 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ARMCX1Q9P291 453 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 TBC1D2BQ9UPU7 963 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 JAG2Q9Y219 1238 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ZNF510Q9Y2H8 683 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms