RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 RSPH9Q9H1X1 276 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P15-201ENST00000507326 IPPKQ9H8X2 491 aa4.42□□□□□ -1.7
HMGB3P15-201ENST00000507326 ESYT3A0FGR9 886 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 GOLIM4O00461 696 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 TIMM44O43615 452 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 ZNF202O95125 648 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 VIL1P09327 827 aaKnown RBP4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 FGRP09769 529 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 POLD1P28340 1107 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 EPHA5P54756 1037 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 RRADP55042 308 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 RAC3P60763 192 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 GPR85P60893 370 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 TGFB2P61812 414 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 EXOSC10Q01780 885 aaKnown RBP4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 NOLC1Q14978 699 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 RNF151Q2KHN1 245 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 EFCAB2Q5VUJ9 269 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 IGFL4Q6B9Z1 124 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 LRP10Q7Z4F1 713 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 HDGFL2Q7Z4V5 671 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 IFNL3Q8IZI9 196 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 C1orf131Q8NDD1 294 aaKnown RBP4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 OSBP2Q969R2 916 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 ZNF622Q969S3 477 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 ZNF503Q96F45 646 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 ZFYVE21Q9BQ24 234 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 INO80BQ9C086 356 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 PDGFDQ9GZP0 370 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 ARHGEF4Q9NR80 690 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 RPS6KL1Q9Y6S9 549 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 NISCHQ9Y2I1 1504 aa4.41□□□□□ -1.7
HMGB3P15-201ENST00000507326 CCDC163A0A0D9SF12 145 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 ALG1L2C9J202 215 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 FAM47E-STBD1D6RA91 191 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 CT47B1P0C2W7 299 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 FGFR1P11362 822 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 PABPC1P11940 636 aaKnown RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 ACO1P21399 889 aaKnown RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 CNGA1P29973 690 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 GNALP38405 381 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 TRAPPC10P48553 1259 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 EPHB1P54762 984 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 DGCR2P98153 550 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 ABHD18Q0P651 414 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 IFRD2Q12894 506 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 TOP3AQ13472 1001 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 CCDC70Q6NSX1 233 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 NSMFQ6X4W1 530 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 SMAP1Q8IYB5 467 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 RPUSD2Q8IZ73 545 aaKnown RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 SNRNP27Q8WVK2 155 aaKnown RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 EDAQ92838 391 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 CDC5LQ99459 802 aaKnown RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 DPYSL5Q9BPU6 564 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 ZNF700Q9H0M5 742 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 CASS4Q9NQ75 786 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 MAP3K20Q9NYL2 800 aaKnown RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 FBXO2Q9UK22 296 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 OAZ3Q9UMX2 235 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 NOL7Q9UMY1 257 aaKnown RBP4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 EID1Q9Y6B2 187 aa4.4□□□□□ -1.71
HMGB3P15-201ENST00000507326 ASXL2Q76L83 1435 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 TCRBV5S4A2TA0A5A2 114 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 IQCA1LA6NCM1 817 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 GOLGA6CA6NDK9 693 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 GOLGA6BA6NDN3 693 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 CDC14BO60729 498 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 CUTAO60888 179 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 RAD17O75943 681 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 GOLGA6DP0CG33 693 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 CR2P20023 1033 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 PTH1RQ03431 593 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 DBPQ10586 325 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 DDR2Q16832 855 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 WDR72Q3MJ13 1102 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 ZMAT1Q5H9K5 638 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 BTBD8Q5XKL5 378 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 ZKSCAN2Q63HK3 967 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 STYK1Q6J9G0 422 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 DPP8Q6V1X1 898 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 Q6ZSN1 163 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 ANKS3Q6ZW76 656 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 POLNQ7Z5Q5 900 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 MCF2L2Q86YR7 1114 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 CCDC89Q8N998 374 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 SH3RF2Q8TEC5 729 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 OR14A2Q96R54 314 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 C12orf65Q9H3J6 166 aaKnown RBP4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 RIC8BQ9NVN3 520 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 GOLGA6AQ9NYA3 693 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 ARHGAP28Q9P2N2 729 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 FEZ2Q9UHY8 353 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 MCM8Q9UJA3 840 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 NR2E1Q9Y466 385 aa4.39□□□□□ -1.71
HMGB3P15-201ENST00000507326 TRAV20A0A0B4J274 112 aa4.38□□□□□ -1.71
HMGB3P15-201ENST00000507326 TTC36A6NLP5 189 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms