RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PCOLCE2Q9UKZ9 415 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 JAG2Q9Y219 1238 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 SIK3Q9Y2K2 1263 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 TMX2Q9Y320 296 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 FSD2A1L4K1 749 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 A6NLC8 198 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 DVL2O14641 736 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 DHX16O60231 1041 aaKnown RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 LILRB5O75023 590 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 CYP17A1P05093 508 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZBTB48P10074 688 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ATP1A3P13637 1013 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 BRAFP15056 766 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 CYP7A1P22680 504 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 POLD1P28340 1107 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 CAP2P40123 477 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 BAG6P46379 1132 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 HSPA7P48741 367 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ALDH9A1P49189 494 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 AGFG1P52594 562 aaKnown RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ARL4CP56559 192 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 LACTBP83111 547 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 SPIRE1Q08AE8 756 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 DUSP4Q13115 394 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 LSAMPQ13449 338 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 GPR19Q15760 415 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ARL13BQ3SXY8 428 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ANGEL2Q5VTE6 544 aaKnown RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 SPATA1Q5VX52 437 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 MBNL2Q5VZF2 373 aaKnown RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 MSL1Q68DK7 614 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 SWSAP1Q6NVH7 229 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ESPNLQ6ZVH7 1005 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 CXorf67Q86X51 503 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 CPNE8Q86YQ8 564 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 VWA5B2Q8N398 1253 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 SH2D3CQ8N5H7 860 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 C7orf31Q8N865 590 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 PCYOX1LQ8NBM8 494 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 SLC30A5Q8TAD4 765 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 UBASH3BQ8TF42 649 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 AUTS2Q8WXX7 1259 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ERCC4Q92889 916 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 MTFMTQ96DP5 389 aaKnown RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 APIPQ96GX9 242 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 RAX2Q96IS3 184 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 FBXL18Q96ME1 805 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 TIGD1Q96MW7 591 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 NT5C1BQ96P26 610 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 FCRL3Q96P31 734 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 TTLL2Q9BWV7 592 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ACE2Q9BYF1 805 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 BTBD1Q9H0C5 482 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZMAT4Q9H898 229 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 C14orf93Q9H972 538 aaKnown RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 SMURF1Q9HCE7 757 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 UBN1Q9NPG3 1134 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 PRR13Q9NZ81 148 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 AASSQ9UDR5 926 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 DPP7Q9UHL4 492 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 CPA4Q9UI42 421 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 KCNH3Q9ULD8 1083 aa4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 TIMM13Q9Y5L4 95 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P22-201ENST00000505315 TRBV23OR9-2A0A075B6M9 112 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ELOA3CA0A087WX78 387 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ST20-MTHFSA0A0A6YYL1 179 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 A0A1W2PPL8 197 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 PABPN1LA6NDY0 278 aaKnown RBP4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 FAM187AA6NFU0 413 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ELOA3DA6NLF2 546 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 B4DLN1 442 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 H3BUI4 141 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ARNTLO00327 626 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 FOXN3O00409 490 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 C2CD2LO14523 706 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ADAM11O75078 769 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ZBED4O75132 1171 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 FGF18O76093 207 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 SLITRK5O94991 958 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 CBX7O95931 251 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 TBX18O95935 607 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ADH5P11766 374 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 NCAM1P13591 858 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 DRD2P14416 443 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 RAB6AP20340 208 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 MX2P20592 715 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 SLC7A1P30825 629 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 BCL6P41182 706 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ITGA8P53708 1063 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 RPL11P62913 178 aaKnown RBP4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 KIF22Q14807 665 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 IFI16Q16666 785 aaKnown RBP4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 PFKFB4Q16877 469 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 INF2Q27J81 1249 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ELOA3BQ3SY89 546 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 ZACNQ401N2 412 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 GPATCH4Q5T3I0 446 aaKnown RBP4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 KLHDC7AQ5VTJ3 777 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 EEF1DP3Q658K8 133 aa4.21□□□□□ -1.74
HMGB1P22-201ENST00000505315 TIGD7Q6NT04 549 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms