RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 AAASQ9NRG9 546 aa22.54■■□□□ 1.2
UBE2D3-220ENST00000505307 LOXHD1Q8IVV2 1947 aa22.54■■□□□ 1.2
UBE2D3-220ENST00000505307 MYO7AQ13402 2215 aa22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 C9IYK1 514 aa22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 H3BQ06 376 aaPredicted RBP22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 PAN2Q504Q3 1202 aaKnown RBP22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 EFCAB12Q6NXP0 572 aa22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 TRMT1LQ7Z2T5 733 aaKnown RBP22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 GJD3Q8N144 294 aa22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 OSMRQ99650 979 aa22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 ELAC1Q9H777 363 aaKnown RBP22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 ALG13Q9NP73 1137 aaKnown RBP22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 PDRG1Q9NUG6 133 aa22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 PRKAG3Q9UGI9 489 aa22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 EVPLQ92817 2033 aa22.53■■□□□ 1.2
UBE2D3-220ENST00000505307 ZNF862O60290 1169 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 MGEA5O60502 916 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 CDKL5O76039 1030 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 VTNP04004 478 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 IL9P15248 144 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 FAM189BP81408 668 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 PRKCEQ02156 737 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 HYAL1Q12794 435 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 FAM228AQ86W67 206 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 LINC01465Q8N7H1 131 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 SPPL3Q8TCT6 385 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 UPF3BQ9BZI7 483 aaKnown RBP22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 EPHX3Q9H6B9 360 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 TMEM161AQ9NX61 479 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 AKT3Q9Y243 479 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 PCDHB12Q9Y5F1 795 aa22.52■■□□□ 1.2
UBE2D3-220ENST00000505307 PI4K2BG5E9Z4 385 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 M0R2N6 131 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 PSMD10O75832 226 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 ITGB1P05556 798 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 CLCN3P51790 818 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 NLRP11P59045 1033 aaKnown RBP22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 CDC42EP1Q00587 391 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 UBE3AQ05086 875 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 CSPP1Q1MSJ5 1256 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 KLHL23Q8NBE8 558 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 UNC45AQ9H3U1 944 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 ATP6V0A4Q9HBG4 840 aa22.51■■□□□ 1.19
UBE2D3-220ENST00000505307 HOXA2O43364 376 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 CHMP2AO43633 222 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 EIF4BP23588 611 aaKnown RBP22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 SSTR3P32745 418 aaPredicted RBP22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 LTBRP36941 435 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 TBC1D8BQ0IIM8 1120 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 CAMK1Q14012 370 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 DSC3Q14574 896 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 NONOQ15233 471 aaKnown RBP eCLIP22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 TMEM31Q5JXX7 168 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 MIER3Q7Z3K6 550 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 KRT25Q7Z3Z0 450 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 MBOAT7Q96N66 472 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 ADAMTS10Q9H324 1103 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 CD320Q9NPF0 282 aa22.5■■□□□ 1.19
UBE2D3-220ENST00000505307 TBKBP1A7MCY6 615 aa22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 GPR37L1O60883 481 aa22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 ZSCAN20P17040 1043 aaPredicted RBP22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 XBP1P17861 261 aa22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 STK3Q13188 491 aa22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 XKR3Q5GH77 459 aa22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 SPOUT1Q5T280 376 aaKnown RBP22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 POF1BQ8WVV4 589 aa22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 PPP1R16BQ96T49 567 aa22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 NIFKQ9BYG3 293 aaKnown RBP22.49■■□□□ 1.19
UBE2D3-220ENST00000505307 IBSPP21815 317 aaPredicted RBP22.48■■□□□ 1.19
UBE2D3-220ENST00000505307 GATMP50440 423 aa22.48■■□□□ 1.19
UBE2D3-220ENST00000505307 ADAM15Q13444 863 aa22.48■■□□□ 1.19
UBE2D3-220ENST00000505307 TARBP2Q15633 366 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-220ENST00000505307 B3GNT9Q6UX72 402 aa22.48■■□□□ 1.19
UBE2D3-220ENST00000505307 LRRC71Q8N4P6 559 aa22.48■■□□□ 1.19
UBE2D3-220ENST00000505307 LARP6Q9BRS8 491 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-220ENST00000505307 FSD2A1L4K1 749 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 TDP2O95551 362 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 ALADP13716 330 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 DNAJB1P25685 340 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 NPY5RQ15761 445 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 UGCGQ16739 394 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 FAM102BQ5T8I3 360 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 PDE12Q6L8Q7 609 aaKnown RBP22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 ETNPPLQ8TBG4 499 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 LRFN3Q9BTN0 628 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 TMEM117Q9H0C3 514 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 SLKQ9H2G2 1235 aaPredicted RBP22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 IGFLR1Q9H665 355 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 DDX25Q9UHL0 483 aaKnown RBP22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 STK36Q9NRP7 1315 aa22.47■■□□□ 1.19
UBE2D3-220ENST00000505307 CSPG5O95196 566 aa22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 DARSP14868 501 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 LAG3P18627 525 aa22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 DNM2P50570 870 aa22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 GPC3P51654 580 aa22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 ANAPC15P60006 121 aa22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 ANKRD1Q15327 319 aa22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 SMAD2Q15796 467 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 ADHFE1Q8IWW8 467 aa22.46■■□□□ 1.19
UBE2D3-220ENST00000505307 EFHBQ8N7U6 833 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms