RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ZNF317Q96PQ6 595 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 PCDHGC5Q9Y5F6 944 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 PNPLA7Q6ZV29 1317 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 BAZ2AQ9UIF9 1905 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 SSU72P8A0A1W2PR75 194 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 ANKRD63C9JTQ0 380 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 STXBP3O00186 592 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 RASGRF2O14827 1237 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 GNPATO15228 680 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 SPAG7O75391 227 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 ATP2A2P16615 1042 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 MSH2P43246 934 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 GALCP54803 685 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 LACTBP83111 547 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 ATP11AP98196 1134 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 CYP4A11Q02928 519 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 MTMR3Q13615 1198 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 FAM98CQ17RN3 349 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 FIGNQ5HY92 759 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 RBM26Q5T8P6 1007 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 MIS18BP1Q6P0N0 1132 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 BARGINQ6ZT62 677 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 MIGA2Q7L4E1 593 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 CCDC105Q8IYK2 499 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 RBM46Q8TBY0 533 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 TBC1D22AQ8WUA7 517 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 CTNNBL1Q8WYA6 563 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 RPGRQ92834 1020 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 TAS2R14Q9NYV8 317 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 HAO1Q9UJM8 370 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 AMFRQ9UKV5 643 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 ATXN2Q99700 1313 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 IGSF9BQ9UPX0 1349 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 TCRBV7S2A1N4TA0A589 114 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 POTEB3A0JP26 581 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 TMEM120BA0PK00 339 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 WDR91A4D1P6 747 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 POTECB2RU33 542 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 CALRP27797 417 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 SLC16A2P36021 539 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 IRX1P78414 480 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 RNF220Q5VTB9 566 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 POTEBQ6S5H4 581 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 LRIG3Q6UXM1 1119 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 UNC13DQ70J99 1090 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 HOOK3Q86VS8 718 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 DTX3LQ8TDB6 740 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 ADAM7Q9H2U9 754 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 ACP6Q9NPH0 428 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 RNF14Q9UBS8 474 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 MAD2L2Q9UI95 211 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 HDAC9Q9UKV0 1011 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 STRCQ7RTU9 1775 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 MYH7P12883 1935 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 LCA5LO95447 670 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 LINGO3P0C6S8 592 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 UCHL3P15374 230 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 GRIK3Q13003 919 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 PABPC4Q13310 644 aaKnown RBP eCLIP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 MESDQ14696 234 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 NKX1-1Q15270 411 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 EXOC3L4Q17RC7 722 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 LACTB2Q53H82 288 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 GPBP1Q86WP2 473 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 PALB2Q86YC2 1186 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 SRRM1Q8IYB3 904 aaKnown RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 TAB3Q8N5C8 712 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 TTC8Q8TAM2 541 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 SLC35G2Q8TBE7 412 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 ATXN2LQ8WWM7 1075 aaKnown RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 KRT35Q92764 455 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 TSC22D3Q99576 134 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 TMEM47Q9BQJ4 181 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 PAGR1Q9BTK6 254 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 ADAM22Q9P0K1 906 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 CAMTA1Q9Y6Y1 1673 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 HIP1RO75146 1068 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 ENTPD5O75356 428 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 TAL1P17542 331 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 RBM5P52756 815 aaKnown RBP eCLIP8.24□□□□□ -1.091e-19■■■■■ 58.1
NEDD9-208ENST00000504387 USP4Q13107 963 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 PPP2R5BQ15173 497 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 AGBL2Q5U5Z8 902 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 TBC1D9BQ66K14 1250 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 INTS5Q6P9B9 1019 aaKnown RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 NSMFQ6X4W1 530 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 REXO1Q8N1G1 1221 aaKnown RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 ARHGEF2Q92974 986 aaKnown RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 ARHGEF26Q96DR7 871 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 DDX50Q9BQ39 737 aaKnown RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 EMILIN3Q9NT22 766 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 DLGAP2Q9P1A6 1054 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 CHD4Q14839 1912 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 AKAP11Q9UKA4 1901 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 SNX3O60493 162 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 SMNDC1O75940 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 CBX6O95503 412 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 GJC1P36383 396 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms