RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 KCNJ6P48051 423 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 PRKCZQ05513 592 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 FMNL3Q8IVF7 1028 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 CNOT6LQ96LI5 555 aaKnown RBP10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 CCDC42Q96M95 316 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 TOPORSQ9NS56 1045 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 SLC45A1Q9Y2W3 748 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 CACNA1SQ13698 1873 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 PVALEFA0A1B0GWK0 134 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 PRKCBP05771 671 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 VEGFBP49765 207 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 EFNA5P52803 228 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 TNNC1P63316 161 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 FKBP3Q00688 224 aaKnown RBP10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 HAUS6Q7Z4H7 955 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 FANCLQ9NW38 375 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 SEL1LQ9UBV2 794 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 MYL7Q01449 175 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 USP49Q70CQ1 688 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 FMR1NBQ8N0W7 255 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 REEP2Q9BRK0 252 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 TIPINQ9BVW5 301 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 SENP6Q9GZR1 1112 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 ANKEF1Q9NU02 776 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 ZNF233A6NK53 670 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 CCDC85CA6NKD9 419 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 GPR25O00155 361 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 LDHAP00338 332 aaKnown RBP10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 UBA1P22314 1058 aaKnown RBP10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 GRIN1Q05586 938 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 ZNF484Q5JVG2 852 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 GBP6Q6ZN66 633 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 NIPA1Q7RTP0 329 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 TRIM50Q86XT4 487 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 IL31RAQ8NI17 732 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 URGCPQ8TCY9 931 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 SETD4Q9NVD3 440 aa10.34□□□□□ -0.75
GAPVD1-219ENST00000495955 MED24O75448 989 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 NMT1P30419 496 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 PPP2R3AQ06190 1150 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 MFSD10Q14728 455 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 LDLRAD1Q5T700 205 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 PPM1KQ8N3J5 372 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 MICAL1Q8TDZ2 1067 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 DEFB118Q96PH6 123 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 FAM213AQ9BRX8 229 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 CRACR2AQ9BSW2 395 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 RBSNQ9H1K0 784 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 TMX1Q9H3N1 280 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 RNF216Q9NWF9 866 aaPredicted RBP10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 FOXN1O15353 648 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 UPP2O95045 317 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 TNFAIP3P21580 790 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 NLRP11P59045 1033 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 ASIC2Q16515 512 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 TRMT1Q9NXH9 659 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 ODF2LQ9ULJ1 636 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 MACROD2A1Z1Q3 448 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 KIF5CO60282 957 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 CCNE1P24864 410 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 KRT9P35527 623 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 SMC1AQ14683 1233 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 MTIF3Q9H2K0 278 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 NLRC4Q9NPP4 1024 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 BAZ2BQ9UIF8 2168 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 TAF1LQ8IZX4 1826 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 TMCO5BA8MYB1 307 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 CELF3Q5SZQ8 465 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 CCDC186Q7Z3E2 898 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 METTL23Q86XA0 190 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 PDGFCQ9NRA1 345 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 RNF186Q9NXI6 227 aa10.33□□□□□ -0.76
GAPVD1-219ENST00000495955 ASAP2O43150 1006 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 SLC26A4O43511 780 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 CAPN15O75808 1086 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 CYP3A4P08684 503 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 KLRC1P26715 233 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 SLC26A2P50443 739 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 CLCN3P51790 818 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 ARPP19P56211 112 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 PAK2Q13177 524 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 VWA3BQ502W6 1294 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 GJC2Q5T442 439 aaPredicted RBP10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 FAM117BQ6P1L5 589 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 PPFIA4O75335 1185 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 PLS3P13797 630 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 ERCC5P28715 1186 aaPredicted RBP10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 HSD17B4P51659 736 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 SURF1Q15526 300 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 CNGA4Q8IV77 575 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 SLAIN1Q8ND83 568 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 GOLGA1Q92805 767 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 NOX5Q96PH1 765 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 KCND2Q9NZV8 630 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 RWDD2AQ9UIY3 292 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 AKR1B15C9JRZ8 316 aaPredicted RBP10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 CXCL17Q6UXB2 119 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 SLC5A5Q92911 643 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 NUP58Q9BVL2 599 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms