RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 FAM126AQ9BYI3 521 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 ZDHHC5Q9C0B5 715 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 LUC7LQ9NQ29 371 aaKnown RBP6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 NOP58Q9Y2X3 529 aaKnown RBP6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 ZDHHC9Q9Y397 364 aa6.71□□□□□ -1.34
HMGB1P38-201ENST00000490557 A0A0G2JNJ9 132 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 HMGCRP04035 888 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 COL6A1P12109 1028 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 POLD1P28340 1107 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 KCNQ1P51787 676 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 MOGSQ13724 837 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 NT5DC1Q5TFE4 455 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 KIAA1841Q6NSI8 718 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 KLHL36Q8N4N3 616 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 CLRN3Q8NCR9 226 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 BRINP2Q9C0B6 783 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 ZCCHC4Q9H5U6 513 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 SLC5A4Q9NY91 659 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 Q9UFV3 132 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 SYNPO2Q9UMS6 1093 aa6.7□□□□□ -1.34
HMGB1P38-201ENST00000490557 MROH6A6NGR9 719 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 C9orf118A6NHY6 69 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 KLHL18O94889 574 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 MEOX1P50221 254 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 IGBP1P78318 339 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 FAM50AQ14320 339 aaKnown RBP6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 MYBPC3Q14896 1274 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 NOLC1Q14978 699 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 ZNF568Q3ZCX4 644 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 KANK2Q63ZY3 851 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 Q6ZUG5 572 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 LHFPL2Q6ZUX7 228 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 REXO1L1PQ8IX06 675 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 RTKN2Q8IZC4 609 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 PRPF38AQ8NAV1 312 aaKnown RBP6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 AHCYL2Q96HN2 611 aaKnown RBP6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 ZNF496Q96IT1 587 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 MS4A5Q9H3V2 200 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 KCMF1Q9P0J7 381 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 CDC42EP3Q9UKI2 254 aa6.69□□□□□ -1.34
HMGB1P38-201ENST00000490557 ALG1L2C9J202 215 aa6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 TRIM13O60858 407 aa6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 POU3F3P20264 500 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 GUCY2FP51841 1108 aa6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 DGKDQ16760 1214 aa6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 NECAB2Q7Z6G3 386 aa6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 RALYLQ86SE5 291 aaKnown RBP6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 CXorf67Q86X51 503 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 COG1Q8WTW3 980 aa6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 CARD11Q9BXL7 1154 aa6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 MTG2Q9H4K7 406 aa6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 SAE1Q9UBE0 346 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P38-201ENST00000490557 LCHNA4D1U4 455 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 GOLGA8AA7E2F4 631 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 GOLGA8BA8MQT2 603 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 PCDH8O95206 1070 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 ETV4P43268 484 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 CDKN1CP49918 316 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 TOP3AQ13472 1001 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 USP10Q14694 798 aaKnown RBP6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 LCNL1Q6ZST4 164 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 MARCH10Q8NA82 808 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 SYT8Q8NBV8 401 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 OR5AN1Q8NGI8 311 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 GPATCH3Q96I76 525 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 ANO3Q9BYT9 981 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 PUS7LQ9H0K6 701 aaKnown RBP6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 TOPORSQ9NS56 1045 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 FAM184BQ9ULE4 1060 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 WASHC2AQ641Q2 1341 aa6.67□□□□□ -1.34
HMGB1P38-201ENST00000490557 PRKD3O94806 890 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 XPAP23025 273 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 RRADP55042 308 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 SCAND1P57086 179 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 ITKQ08881 620 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 TMEM200BQ69YZ2 307 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 CCDC62Q6P9F0 684 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 GPR155Q7Z3F1 870 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 PLEKHH3Q7Z736 793 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 KBTBD2Q8IY47 623 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 MTMR8Q96EF0 704 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 DYDC2Q96IM9 177 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 HIST1H2AHQ96KK5 128 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 ACAP3Q96P50 834 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 HIST1H2AJQ99878 128 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 NOL10Q9BSC4 688 aaKnown RBP6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 WNT8AQ9H1J5 351 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 SEMA4AQ9H3S1 761 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 HOMER2Q9NSB8 354 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 MAGEL2Q9UJ55 1249 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 ADAM29Q9UKF5 820 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 PHLDB1Q86UU1 1377 aa6.66□□□□□ -1.34
HMGB1P38-201ENST00000490557 ELL2O00472 640 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 NOBOXO60393 691 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 MAFO75444 373 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 CLEC2LP0C7M8 214 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 STAT5BP51692 787 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 EVA1CP58658 441 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms