RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 IQCF3P0C7M6 154 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 RSPH10BP0C881 870 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 CYP2C18P33260 490 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 GRB10Q13322 594 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 TMEM119Q4V9L6 283 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 KIAA0319LQ8IZA0 1049 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 LINC01465Q8N7H1 131 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 TCP11Q8WWU5 503 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 WNT8BQ93098 351 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 EPSTI1Q96J88 318 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 PNMA5Q96PV4 448 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 MTRQ99707 1265 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 SH2D3AQ9BRG2 576 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 SUGCTQ9HAC7 445 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 ATP6V0A4Q9HBG4 840 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 MRPS6P82932 125 aaKnown RBP17.77■□□□□ 0.44
HDAC7-224ENST00000488927 FPGSQ05932 587 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 PPIGQ13427 754 aaKnown RBP eCLIP17.77■□□□□ 0.44
HDAC7-224ENST00000488927 EMC2Q15006 297 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 CSPP1Q1MSJ5 1256 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 FAM26DQ5JW98 314 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 SPECC1Q5M775 1068 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 AXDND1Q5T1B0 1012 aaPredicted RBP17.77■□□□□ 0.44
HDAC7-224ENST00000488927 ZNF618Q5T7W0 954 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 ADALQ6DHV7 355 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 CCDC73Q6ZRK6 1079 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 MCPH1Q8NEM0 835 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 BADQ92934 168 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 ZBTB10Q96DT7 871 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 PYM1Q9BRP8 204 aaKnown RBP17.77■□□□□ 0.44
HDAC7-224ENST00000488927 WNT8AQ9H1J5 351 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 BHMT2Q9H2M3 363 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 FAM13BQ9NYF5 915 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 KCND2Q9NZV8 630 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 AKT3Q9Y243 479 aa17.77■□□□□ 0.44
HDAC7-224ENST00000488927 UMODL1Q5DID0 1318 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 E9PMD0 336 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 PFKMP08237 780 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 PLCG1P19174 1290 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 ITGB8P26012 769 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 CLCN3P51790 818 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 CCL23P55773 120 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 KARSQ15046 597 aaKnown RBP17.76■□□□□ 0.43
HDAC7-224ENST00000488927 PADI6Q6TGC4 694 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 RPUSD2Q8IZ73 545 aaKnown RBP17.76■□□□□ 0.43
HDAC7-224ENST00000488927 LRRC71Q8N4P6 559 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 STK17AQ9UEE5 414 aa17.76■□□□□ 0.43
HDAC7-224ENST00000488927 ASAP2O43150 1006 aa17.75■□□□□ 0.43
HDAC7-224ENST00000488927 USO1O60763 962 aaKnown RBP17.75■□□□□ 0.43
HDAC7-224ENST00000488927 CTSHP09668 335 aa17.75■□□□□ 0.43
HDAC7-224ENST00000488927 CYP11B2P19099 503 aa17.75■□□□□ 0.43
HDAC7-224ENST00000488927 RRAGBQ5VZM2 374 aa17.75■□□□□ 0.43
HDAC7-224ENST00000488927 FAM43BQ6ZT52 329 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-224ENST00000488927 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
HDAC7-224ENST00000488927 USP38Q8NB14 1042 aa17.75■□□□□ 0.43
HDAC7-224ENST00000488927 PSPC1Q8WXF1 523 aaKnown RBP17.75■□□□□ 0.43
HDAC7-224ENST00000488927 TIPINQ9BVW5 301 aa17.75■□□□□ 0.43
HDAC7-224ENST00000488927 CELF4Q9BZC1 486 aaKnown RBP17.75■□□□□ 0.43
HDAC7-224ENST00000488927 SUCLA2Q9P2R7 463 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-224ENST00000488927 TRPV2Q9Y5S1 764 aa17.75■□□□□ 0.43
HDAC7-224ENST00000488927 SQORQ9Y6N5 450 aa17.75■□□□□ 0.43
HDAC7-224ENST00000488927 TNRC18O15417 2968 aaPredicted RBP17.74■□□□□ 0.43
HDAC7-224ENST00000488927 A0A087WWV3 80 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 PLA2G4BP0C869 781 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 CMA1P23946 247 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 MAGEA10P43363 369 aaPredicted RBP17.74■□□□□ 0.43
HDAC7-224ENST00000488927 MDM2Q00987 491 aaPredicted RBP17.74■□□□□ 0.43
HDAC7-224ENST00000488927 MGAT3Q09327 533 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 MXD4Q14582 209 aaPredicted RBP17.74■□□□□ 0.43
HDAC7-224ENST00000488927 RESP18Q5W5W9 173 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 TRAF7Q6Q0C0 670 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 SHC4Q6S5L8 630 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 KCNK18Q7Z418 384 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 SYT2Q8N9I0 419 aaPredicted RBP17.74■□□□□ 0.43
HDAC7-224ENST00000488927 LARP4BQ92615 738 aaKnown RBP17.74■□□□□ 0.43
HDAC7-224ENST00000488927 RAD54LQ92698 747 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 SCLYQ96I15 445 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 CHAMP1Q96JM3 812 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 PLIN2Q99541 437 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 CUEDC2Q9H467 287 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 CDY2AQ9Y6F7 541 aa17.74■□□□□ 0.43
HDAC7-224ENST00000488927 TRIP12Q14669 1992 aaPredicted RBP17.73■□□□□ 0.43
HDAC7-224ENST00000488927 A0A1W2PQ27 194 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 A0A1W2PQ64 194 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 A0A1W2PQD8 194 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 GOLGA6L4A6NEF3 574 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 CHRNA1P02708 482 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 VTNP04004 478 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 SSBP05455 408 aaKnown RBP eCLIP17.73■□□□□ 0.43
HDAC7-224ENST00000488927 CSF2RAP15509 400 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 STAT6P42226 847 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 CRYBB1P53674 252 aaPredicted RBP17.73■□□□□ 0.43
HDAC7-224ENST00000488927 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
HDAC7-224ENST00000488927 ODR4Q5SWX8 454 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 PSRC1Q6PGN9 363 aaPredicted RBP17.73■□□□□ 0.43
HDAC7-224ENST00000488927 ZNF410Q86VK4 478 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 IQUBQ8NA54 791 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 TMEM143Q96AN5 459 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 IL23AQ9NPF7 189 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 XPNPEP1Q9NQW7 623 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms