RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 AXIN1O15169 862 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 FIBPO43427 364 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 IDH1O75874 414 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 AKAP3O75969 853 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 AVPP01185 164 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 CKBP12277 381 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 NPR3P17342 541 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 SCP2P22307 547 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 HOXA6P31267 233 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PPARAQ07869 468 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 CELF3Q5SZQ8 465 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PDXDC1Q6P996 788 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 METTL7BQ6UX53 244 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 TSHZ1Q6ZSZ6 1077 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 CYP2U1Q7Z449 544 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 FBXO11Q86XK2 927 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 TMEM192Q8IY95 271 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 TMEM57Q8N5G2 664 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 SMRP1Q8NCR6 262 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 KCNN1Q92952 543 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 INSM2Q96T92 566 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 TMEM175Q9BSA9 504 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 MRPL9Q9BYD2 267 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 WDR11Q9BZH6 1224 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 KRT23Q9C075 422 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 PRDM12Q9H4Q4 367 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 MKNK2Q9HBH9 465 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 ALG13Q9NP73 1137 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 MAP4K5Q9Y4K4 846 aa3.16□□□□□ -1.9
DEPDC1-203ENST00000488146 FANCMQ8IYD8 2048 aa3.15□□□□□ -1.9
DEPDC1-203ENST00000488146 SMIM35A0A1B0GVV1 85 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 TTC24A2A3L6 582 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 C17orf102A2RUQ5 167 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 SPATA31C2B4DYI2 1134 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 PRPF40AO75400 957 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 FBXO24O75426 580 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 DDAH1O94760 285 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 ZIC2O95409 532 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CALM1P0DP23 149 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CALM2P0DP24 149 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CALM3P0DP25 149 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 HOXA9P31269 272 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 DPP6P42658 865 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 SARSP49591 514 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 HDAC1Q13547 482 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 TRIP4Q15650 581 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 PCNX4Q63HM2 1172 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 KIAA1841Q6NSI8 718 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 TREML4Q6UXN2 200 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 RNF207Q6ZRF8 634 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 DPH6Q7L8W6 267 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 NLRX1Q86UT6 975 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 SUGP1Q8IWZ8 645 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CCDC105Q8IYK2 499 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 IFNL3Q8IZI9 196 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 ZNF295-AS1Q8N0V1 137 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 IL17RAQ96F46 866 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 INPP4AQ96PE3 977 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CDK15Q96Q40 435 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CTAGE1Q96RT6 745 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 TSPAN18Q96SJ8 248 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 ESYT1Q9BSJ8 1104 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 SPZ1Q9BXG8 430 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 OXCT2Q9BYC2 517 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 OSBPL7Q9BZF2 842 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 TRPV5Q9NQA5 729 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CHST12Q9NRB3 414 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 IGSF9Q9P2J2 1179 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 SAP30BPQ9UHR5 308 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 DACH1Q9UI36 760 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CDV3Q9UKY7 258 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CCPG1Q9ULG6 757 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 COL4A2P08572 1712 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 KIF26AQ9ULI4 1882 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 CNTNAP2Q9UHC6 1331 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 MYADML2A6NDP7 307 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 GAS2O43903 313 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 PGK1P00558 417 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 FOSP01100 380 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 TSPY3P0CV98 308 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 TSPY8P0CW00 308 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 GLULP15104 373 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 TAL1P17542 331 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 BRD2P25440 801 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 MZF1P28698 734 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 ZNF76P36508 570 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 SLC1A4P43007 532 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 RAB27AP51159 221 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 WNT7BP56706 349 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 DAB2P98082 770 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 POU5F1BQ06416 359 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 GPNMBQ14956 572 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 PTGISQ16647 500 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 ZNF484Q5JVG2 852 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 ZC3H14Q6PJT7 736 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 PRICKLE2Q7Z3G6 844 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 FTSJ3Q8IY81 847 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 TMTC2Q8N394 836 aa3.15□□□□□ -1.91
DEPDC1-203ENST00000488146 FBXL16Q8N461 479 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms