RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 NHEJ1Q9H9Q4 299 aaPredicted RBP8.97□□□□□ -0.97
SORT1-205ENST00000483508 PRDM5Q9NQX1 630 aaPredicted RBP8.97□□□□□ -0.97
SORT1-205ENST00000483508 BLOC1S4Q9NUP1 217 aa8.97□□□□□ -0.97
SORT1-205ENST00000483508 MTMR7Q9Y216 660 aa8.97□□□□□ -0.97
SORT1-205ENST00000483508 STXBP5LQ9Y2K9 1186 aa8.97□□□□□ -0.97
SORT1-205ENST00000483508 CTDP1Q9Y5B0 961 aaPredicted RBP8.97□□□□□ -0.97
SORT1-205ENST00000483508 LOXHD1Q8IVV2 1947 aa8.96□□□□□ -0.97
SORT1-205ENST00000483508 MYMKA6NI61 221 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 POLR3GO15318 223 aaPredicted RBP8.96□□□□□ -0.98
SORT1-205ENST00000483508 TACC1O75410 805 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 GNA14O95837 355 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 SLC25A27O95847 323 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 TTLL1O95922 423 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 PRLRP16471 622 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 TXKP42681 527 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 CLK2P49760 499 aaKnown RBP8.96□□□□□ -0.98
SORT1-205ENST00000483508 MRPL12P52815 198 aaKnown RBP8.96□□□□□ -0.98
SORT1-205ENST00000483508 RTP1P59025 263 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 EHHADHQ08426 723 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 ZNF543Q08ER8 600 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 ZNF572Q7Z3I7 529 aaPredicted RBP8.96□□□□□ -0.98
SORT1-205ENST00000483508 CLEC10AQ8IUN9 316 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 SHCBP1Q8NEM2 672 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 TRIM58Q8NG06 486 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 FAM71BQ8TC56 605 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 SNX29Q8TEQ0 813 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 CUL5Q93034 780 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 SECISBP2LQ93073 1101 aaKnown RBP8.96□□□□□ -0.98
SORT1-205ENST00000483508 CCDC17Q96LX7 622 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 CCDC42Q96M95 316 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 CEP63Q96MT8 703 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 PNKPQ96T60 521 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 NDST4Q9H3R1 872 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 SEMA6BQ9H3T3 888 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 GOPCQ9HD26 462 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 ABCB6Q9NP58 842 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 MED4Q9NPJ6 270 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 AGPAT5Q9NUQ2 364 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 PLAGL2Q9UPG8 496 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 SIK3Q9Y2K2 1263 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 STK24Q9Y6E0 443 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 FRMPD3Q5JV73 1810 aa8.96□□□□□ -0.98
SORT1-205ENST00000483508 CEP290O15078 2479 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 SSU72P8A0A1W2PR75 194 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 A0A1W2PRG0 241 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 WDR46O15213 610 aaKnown RBP8.95□□□□□ -0.98
SORT1-205ENST00000483508 SEPT4O43236 478 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 ABL1P00519 1130 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 ATP1A1P05023 1023 aaKnown RBP8.95□□□□□ -0.98
SORT1-205ENST00000483508 RHOXF2BP0C7M4 288 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 CYBAP13498 195 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 AKR1B1P15121 316 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 MCM6Q14566 821 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 KCTD2Q14681 263 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 HSP90B2PQ58FF3 399 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 MUM1L1Q5H9M0 696 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 PRAMEF19Q5SWL8 479 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 ZNF697Q5TEC3 545 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 MOXD1Q6UVY6 613 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 SLC39A5Q6ZMH5 540 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 SYN2Q92777 582 aaPredicted RBP8.95□□□□□ -0.98
SORT1-205ENST00000483508 ATG4CQ96DT6 458 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 MTMR8Q96EF0 704 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 FAM161BQ96MY7 647 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 ALS2CR12Q96Q35 445 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 MMP19Q99542 508 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 RHOXF2Q9BQY4 288 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 VCPKMTQ9H867 229 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 VAT1LQ9HCJ6 419 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 SLC39A2Q9NP94 309 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 LUC7LQ9NQ29 371 aaKnown RBP8.95□□□□□ -0.98
SORT1-205ENST00000483508 BMP2KQ9NSY1 1161 aaPredicted RBP8.95□□□□□ -0.98
SORT1-205ENST00000483508 TMEM260Q9NX78 707 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 MTMR10Q9NXD2 777 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 TMX2Q9Y320 296 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 JRKLQ9Y4A0 524 aa8.95□□□□□ -0.98
SORT1-205ENST00000483508 ZBTB5O15062 677 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 PJA2O43164 708 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 SLC37A4O43826 429 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 RARBP10826 455 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 IDEP14735 1019 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 TCP1P17987 556 aaKnown RBP8.94□□□□□ -0.98
SORT1-205ENST00000483508 ADCYAP1R1P41586 468 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 AARSP49588 968 aaKnown RBP eCLIP8.94□□□□□ -0.98
SORT1-205ENST00000483508 MARSP56192 900 aaKnown RBP8.94□□□□□ -0.98
SORT1-205ENST00000483508 VSNL1P62760 191 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 CASP8Q14790 479 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 NCAPH2Q6IBW4 605 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 PDXDC1Q6P996 788 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 LRRC55Q6ZSA7 311 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 RNF180Q86T96 592 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 TEX2Q8IWB9 1127 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 CCDC65Q8IXS2 484 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 MYOCDQ8IZQ8 938 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 ABRAQ8N0Z2 381 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 MMGT1Q8N4V1 131 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 NOA1Q8NC60 698 aaKnown RBP8.94□□□□□ -0.98
SORT1-205ENST00000483508 TRPV1Q8NER1 839 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 NEK11Q8NG66 645 aa8.94□□□□□ -0.98
SORT1-205ENST00000483508 CAGE1Q8TC20 777 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms