RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 INPP4AQ96PE3 977 aaPredicted RBP22.58■■□□□ 1.21
TMED4-204ENST00000477639 VCPKMTQ9H867 229 aa22.58■■□□□ 1.21
TMED4-204ENST00000477639 PARVGQ9HBI0 331 aa22.58■■□□□ 1.21
TMED4-204ENST00000477639 NAGPAQ9UK23 515 aa22.58■■□□□ 1.21
TMED4-204ENST00000477639 PCDHB13Q9Y5F0 798 aa22.58■■□□□ 1.21
TMED4-204ENST00000477639 RBBP6Q7Z6E9 1792 aaKnown RBP22.58■■□□□ 1.2
TMED4-204ENST00000477639 GAS7O60861 476 aa22.58■■□□□ 1.2
TMED4-204ENST00000477639 PSMC2P35998 433 aaKnown RBP22.58■■□□□ 1.2
TMED4-204ENST00000477639 ZSCAN26Q16670 478 aa22.58■■□□□ 1.2
TMED4-204ENST00000477639 B3GNT9Q6UX72 402 aa22.58■■□□□ 1.2
TMED4-204ENST00000477639 UNC45AQ9H3U1 944 aa22.58■■□□□ 1.2
TMED4-204ENST00000477639 EHMT1Q9H9B1 1298 aa22.58■■□□□ 1.2
TMED4-204ENST00000477639 WRAP73Q9P2S5 460 aaPredicted RBP22.58■■□□□ 1.2
TMED4-204ENST00000477639 SEL1LQ9UBV2 794 aa22.58■■□□□ 1.2
TMED4-204ENST00000477639 FRMPD4Q14CM0 1322 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 PSME4Q14997 1843 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 ARP10275 920 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 DLGAP5Q15398 846 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 SPDYE2Q495Y8 402 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 ZNF720Q7Z2F6 126 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 FAM160B2Q86V87 743 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 FAM186BQ8IYM0 893 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 RIN2Q8WYP3 895 aaPredicted RBP22.57■■□□□ 1.2
TMED4-204ENST00000477639 NACC1Q96RE7 527 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 TAOK3Q9H2K8 898 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 GCNT4Q9P109 453 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 ATP8B3O60423 1300 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 UBE4BO95155 1302 aa22.57■■□□□ 1.2
TMED4-204ENST00000477639 SHTN1A0MZ66 631 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 EPHB4P54760 987 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 CAVIN3Q969G5 261 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 WDR11Q9BZH6 1224 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 DMAC2Q9NW81 257 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 PACSIN2Q9UNF0 486 aaPredicted RBP22.56■■□□□ 1.2
TMED4-204ENST00000477639 CES2O00748 559 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 TBC1D12O60347 775 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 RPS6KA5O75582 802 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 CAPN2P17655 700 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 LMNB1P20700 586 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 ALKBH5Q6P6C2 394 aaKnown RBP22.56■■□□□ 1.2
TMED4-204ENST00000477639 EMBQ6PCB8 327 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 GJB7Q6PEY0 223 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 ZFP91Q96JP5 570 aaPredicted RBP22.56■■□□□ 1.2
TMED4-204ENST00000477639 ZNF577Q9BSK1 485 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 MKNK1Q9BUB5 465 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 DEFB129Q9H1M3 183 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 GDF3Q9NR23 364 aa22.56■■□□□ 1.2
TMED4-204ENST00000477639 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.56■■□□□ 1.2
TMED4-204ENST00000477639 GOLGA6BA6NDN3 693 aa22.55■■□□□ 1.2
TMED4-204ENST00000477639 COG2Q14746 738 aa22.55■■□□□ 1.2
TMED4-204ENST00000477639 LDHDQ86WU2 507 aa22.55■■□□□ 1.2
TMED4-204ENST00000477639 LRRC57Q8N9N7 239 aa22.55■■□□□ 1.2
TMED4-204ENST00000477639 AFAP1L1Q8TED9 768 aa22.55■■□□□ 1.2
TMED4-204ENST00000477639 KCND2Q9NZV8 630 aa22.55■■□□□ 1.2
TMED4-204ENST00000477639 ODF2LQ9ULJ1 636 aa22.55■■□□□ 1.2
TMED4-204ENST00000477639 RAD17O75943 681 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 DNA2P51530 1060 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 KSR1Q8IVT5 923 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 CDAN1Q8IWY9 1227 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 FEM1BQ9UK73 627 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 FLOT1O75955 427 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 GLI1P08151 1106 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 SETQ01105 290 aaPredicted RBP22.54■■□□□ 1.2
TMED4-204ENST00000477639 ZYXQ15942 572 aaKnown RBP22.54■■□□□ 1.2
TMED4-204ENST00000477639 IFT20Q8IY31 132 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 TEKT3Q9BXF9 490 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 FBXO28Q9NVF7 368 aa22.54■■□□□ 1.2
TMED4-204ENST00000477639 DDX3XO00571 662 aaKnown RBP eCLIP22.53■■□□□ 1.21e-39■■■□□ 17.8
TMED4-204ENST00000477639 KIF4AO95239 1232 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 FERP16591 822 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 GUCY2CP25092 1073 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 NNTQ13423 1086 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 RPS6KA1Q15418 735 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 IFI16Q16666 785 aaKnown RBP22.53■■□□□ 1.2
TMED4-204ENST00000477639 FKBP1CQ5VVH2 108 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.53■■□□□ 1.2
TMED4-204ENST00000477639 DNAAF5Q86Y56 855 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 RTKN2Q8IZC4 609 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 USP38Q8NB14 1042 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 OLIG1Q8TAK6 271 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 MXRA8Q9BRK3 442 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 STRA6Q9BX79 667 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 AGPAT3Q9NRZ7 376 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 TMEM59LQ9UK28 342 aa22.53■■□□□ 1.2
TMED4-204ENST00000477639 CAP2P40123 477 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 STAT1P42224 750 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 FMO5P49326 533 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 STXBP4Q6ZWJ1 553 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 FAM178BQ8IXR5 827 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 TSEN2Q8NCE0 465 aaKnown RBP22.52■■□□□ 1.2
TMED4-204ENST00000477639 TAF4BQ92750 862 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 RIT2Q99578 217 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 SH3GL2Q99962 352 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 GLIS2Q9BZE0 524 aaPredicted RBP22.52■■□□□ 1.2
TMED4-204ENST00000477639 INTUQ9ULD6 942 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 PPP1R12BO60237 982 aaPredicted RBP22.52■■□□□ 1.2
TMED4-204ENST00000477639 ZBTB48P10074 688 aaPredicted RBP22.52■■□□□ 1.2
TMED4-204ENST00000477639 HSD17B4P51659 736 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 GRIPAP1Q4V328 841 aa22.52■■□□□ 1.2
TMED4-204ENST00000477639 LEKR1Q6ZMV7 388 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms