RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 GNA11P29992 359 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 PLA2G5P39877 138 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 NDUFV1P49821 464 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 NLRP11P59045 1033 aaKnown RBP13.2□□□□□ -0.3
VARS2-208ENST00000477052 NLRP5P59047 1200 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 SETQ01105 290 aaPredicted RBP13.2□□□□□ -0.3
VARS2-208ENST00000477052 ADAM15Q13444 863 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 EFCAB12Q6NXP0 572 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 TEX2Q8IWB9 1127 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 CCDC12Q8WUD4 166 aaPredicted RBP13.2□□□□□ -0.3
VARS2-208ENST00000477052 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
VARS2-208ENST00000477052 FAM122AQ96E09 287 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 AGXT2Q9BYV1 514 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 UPF3BQ9BZI7 483 aaKnown RBP13.2□□□□□ -0.3
VARS2-208ENST00000477052 UNC45AQ9H3U1 944 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 RGS18Q9NS28 235 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 AKT3Q9Y243 479 aa13.2□□□□□ -0.3
VARS2-208ENST00000477052 MYH9P35579 1960 aaKnown RBP13.2□□□□□ -0.3
VARS2-208ENST00000477052 TDP2O95551 362 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 IFNAR1P17181 557 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 CIITAP33076 1130 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 PBX3P40426 434 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 CRYBB1P53674 252 aaPredicted RBP13.19□□□□□ -0.3
VARS2-208ENST00000477052 PRKCEQ02156 737 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 DRP2Q13474 957 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 PUS10Q3MIT2 529 aaKnown RBP13.19□□□□□ -0.3
VARS2-208ENST00000477052 SLC24A5Q71RS6 500 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 RNF169Q8NCN4 708 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 MICAL1Q8TDZ2 1067 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 P2RX5Q93086 422 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 RNF26Q9BY78 433 aaPredicted RBP13.19□□□□□ -0.3
VARS2-208ENST00000477052 DISC1Q9NRI5 854 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 TYW1Q9NV66 732 aaKnown RBP13.19□□□□□ -0.3
VARS2-208ENST00000477052 CLEC1BQ9P126 229 aa13.19□□□□□ -0.3
VARS2-208ENST00000477052 BARX2Q9UMQ3 279 aaPredicted RBP13.19□□□□□ -0.3
VARS2-208ENST00000477052 FNDC1Q4ZHG4 1894 aaPredicted RBP13.19□□□□□ -0.3
VARS2-208ENST00000477052 WDR64B1ANS9 1081 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 GPR182O15218 404 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 GAS7O60861 476 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 GLP2RO95838 553 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 OATP04181 439 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 PSMA5P28066 241 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 ERVFC1P60507 584 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 DSC3Q14574 896 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 RUFY3Q7L099 469 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 ADHFE1Q8IWW8 467 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 SMAP1Q8IYB5 467 aaPredicted RBP13.18□□□□□ -0.3
VARS2-208ENST00000477052 COLGALT1Q8NBJ5 622 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 BICD2Q8TD16 824 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 ADAMTS10Q9H324 1103 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 ATP6V0A4Q9HBG4 840 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 RNF19AQ9NV58 838 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 CD207Q9UJ71 328 aa13.18□□□□□ -0.3
VARS2-208ENST00000477052 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 C19orf67A6NJJ6 358 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 FGF18O76093 207 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 REC8O95072 547 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 SSRP1Q08945 709 aaKnown RBP13.17□□□□□ -0.3
VARS2-208ENST00000477052 SMAD2Q15796 467 aaKnown RBP13.17□□□□□ -0.3
VARS2-208ENST00000477052 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 MCTP2Q6DN12 878 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 LRRC55Q6ZSA7 311 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 FBXL16Q8N461 479 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 LINC01465Q8N7H1 131 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 SLC5A5Q92911 643 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 MSLNLQ96KJ4 702 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 CWH43Q9H720 699 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 C1orf112Q9NSG2 853 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 MUTYHQ9UIF7 546 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 KCNJ14Q9UNX9 436 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 HCN4Q9Y3Q4 1203 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 PCDHB12Q9Y5F1 795 aa13.17□□□□□ -0.3
VARS2-208ENST00000477052 DCXO43602 365 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 NCK2O43639 380 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 EVCP57679 992 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 FAM189BP81408 668 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 SMAD4Q13485 552 aaKnown RBP13.16□□□□□ -0.3
VARS2-208ENST00000477052 NPY5RQ15761 445 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 MTERF2Q49AM1 385 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 NAALADL2Q58DX5 795 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 PLPP4Q5VZY2 271 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 MIER3Q7Z3K6 550 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 EFHBQ8N7U6 833 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 CASD1Q96PB1 797 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 MAP7D2Q96T17 732 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 APOL5Q9BWW9 433 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 TEKT3Q9BXF9 490 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 TLE6Q9H808 572 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 NRBP2Q9NSY0 501 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
VARS2-208ENST00000477052 PCDHA4Q9UN74 947 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms