RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 LRRC15Q8TF66 581 aa17.81■□□□□ 0.44
GPC1-207ENST00000466624 LARP4BQ92615 738 aaKnown RBP17.81■□□□□ 0.44
GPC1-207ENST00000466624 DHX38Q92620 1227 aaKnown RBP17.81■□□□□ 0.44
GPC1-207ENST00000466624 PLIN2Q99541 437 aa17.81■□□□□ 0.44
GPC1-207ENST00000466624 SH2D3AQ9BRG2 576 aa17.81■□□□□ 0.44
GPC1-207ENST00000466624 ATP6V0A4Q9HBG4 840 aa17.81■□□□□ 0.44
GPC1-207ENST00000466624 PDLIM7Q9NR12 457 aa17.81■□□□□ 0.44
GPC1-207ENST00000466624 KCNH3Q9ULD8 1083 aa17.81■□□□□ 0.44
GPC1-207ENST00000466624 MYH11P35749 1972 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 A0A087WWV3 80 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 PITPNM1O00562 1244 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 KIAA0355O15063 1070 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 EVI5O60447 810 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 PLA2G4BP0C869 781 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 PFKFB1P16118 471 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 STAT6P42226 847 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 SLC12A3P55017 1021 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 BFSP2Q13515 415 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 EMC2Q15006 297 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 TRIM71Q2Q1W2 868 aaKnown RBP17.8■□□□□ 0.44
GPC1-207ENST00000466624 EFCAB12Q6NXP0 572 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 PADI6Q6TGC4 694 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 RUFY4Q6ZNE9 571 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 RSPH3Q86UC2 560 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 ZNF710Q8N1W2 664 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 NME8Q8N427 588 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 IQUBQ8NA54 791 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 MCPH1Q8NEM0 835 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 MTRQ99707 1265 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 TIPINQ9BVW5 301 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 MAGEF1Q9HAY2 307 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 TMEM39AQ9NV64 488 aa17.8■□□□□ 0.44
GPC1-207ENST00000466624 SIP14410 1827 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 A0A1B0GVL5 298 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 CYP11B2P19099 503 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 DNM2P50570 870 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 KIAA0319LQ8IZA0 1049 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 PDILTQ8N807 584 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 FSIP1Q8NA03 581 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 TCP11Q8WWU5 503 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 NOC4LQ9BVI4 516 aaKnown RBP17.79■□□□□ 0.44
GPC1-207ENST00000466624 XPNPEP1Q9NQW7 623 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 USP25Q9UHP3 1055 aa17.79■□□□□ 0.44
GPC1-207ENST00000466624 POLR2DO15514 142 aaKnown RBP17.78■□□□□ 0.44
GPC1-207ENST00000466624 USO1O60763 962 aaKnown RBP17.78■□□□□ 0.44
GPC1-207ENST00000466624 GUCY2CP25092 1073 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 CDC42EP1Q00587 391 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
GPC1-207ENST00000466624 IER5Q5VY09 327 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 RINT1Q6NUQ1 792 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 C1orf186Q6ZWK4 172 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 C7orf61Q8IZ16 206 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 METTL13Q8N6R0 699 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 DNAJB3Q8WWF6 145 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 WNT8BQ93098 351 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 ZBTB10Q96DT7 871 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 MAP7D2Q96T17 732 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 PANK2Q9BZ23 570 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 SUGCTQ9HAC7 445 aa17.78■□□□□ 0.44
GPC1-207ENST00000466624 CKBP12277 381 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 SYKP43405 635 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 CLCN3P51790 818 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 NDUFA8P51970 172 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 UBE2HP62256 183 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 MCM6Q14566 821 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 FAM26DQ5JW98 314 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 SV2BQ7L1I2 683 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 LRRC71Q8N4P6 559 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 DPF3Q92784 378 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 DHX58Q96C10 678 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 LRRC27Q9C0I9 530 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 TNMDQ9H2S6 317 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 HIPK3Q9H422 1215 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 GOLPH3LQ9H4A5 285 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 PRKAG2Q9UGJ0 569 aa17.77■□□□□ 0.44
GPC1-207ENST00000466624 TRIM43BA6NCK2 446 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 GOLGA6L22H0YM25 854 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 ASAP2O43150 1006 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 PARNO95453 639 aaKnown RBP17.76■□□□□ 0.43
GPC1-207ENST00000466624 TIMP1P01033 207 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 SSBP05455 408 aaKnown RBP eCLIP17.76■□□□□ 0.43
GPC1-207ENST00000466624 SELPP16109 830 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 ARL2P36404 184 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 THPOP40225 353 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 SH3RF1Q7Z6J0 888 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 PSPC1Q8WXF1 523 aaKnown RBP17.76■□□□□ 0.43
GPC1-207ENST00000466624 TRIM43Q96BQ3 446 aaPredicted RBP17.76■□□□□ 0.43
GPC1-207ENST00000466624 RUSC1Q9BVN2 902 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 FAM49AQ9H0Q0 323 aaPredicted RBP17.76■□□□□ 0.43
GPC1-207ENST00000466624 KBTBD4Q9NVX7 518 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 SUCLA2Q9P2R7 463 aaPredicted RBP17.76■□□□□ 0.43
GPC1-207ENST00000466624 AKT3Q9Y243 479 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 NR2E3Q9Y5X4 410 aa17.76■□□□□ 0.43
GPC1-207ENST00000466624 M0QZ92 97 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 ACTN4O43707 911 aaKnown RBP17.75■□□□□ 0.43
GPC1-207ENST00000466624 PRPF40AO75400 957 aaKnown RBP17.75■□□□□ 0.43
GPC1-207ENST00000466624 CAPN15O75808 1086 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 SLFN14P0C7P3 912 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 MRPS6P82932 125 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms