RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 GOLGA8HP0CJ92 632 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 BCRP11274 1271 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 CNGA1P29973 690 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 GNAQP50148 359 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 IFI16Q16666 785 aaKnown RBP12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 SYDE2Q5VT97 1194 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 MICU3Q86XE3 530 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 ANKRD13CQ8N6S4 541 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 GPRC5AQ8NFJ5 357 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 MYL10Q9BUA6 226 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 R3HDMLQ9H3Y0 253 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 SLC5A4Q9NY91 659 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 MORF4L1Q9UBU8 362 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 MAD2L2Q9UI95 211 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 TSKSQ9UJT2 592 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
TRAPPC3-205ENST00000462715 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 PALM3A6NDB9 673 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 GOLGA8BA8MQT2 603 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 KLRF2D3W0D1 207 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 VWA5AO00534 786 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 FOXN1O15353 648 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 TFRCP02786 760 aaKnown RBP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 TCP1P17987 556 aaKnown RBP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 FXR1P51114 621 aaKnown RBP eCLIP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 CCNA1P78396 465 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 GUCY1A3Q02108 690 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 GUCY1B3Q02153 619 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 SP3Q02447 781 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 PAK2Q13177 524 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 PSMD2Q13200 908 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 LBRQ14739 615 aaKnown RBP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 GKAP1Q5VSY0 366 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 EZH1Q92800 747 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 CENPTQ96BT3 561 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 HVCN1Q96D96 273 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 TBC1D31Q96DN5 1066 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 LZTS2Q9BRK4 669 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 MMTAG2Q9BU76 263 aaKnown RBP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 PAPOLBQ9NRJ5 636 aaKnown RBP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 SAMSN1Q9NSI8 373 aaKnown RBP12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 PRR12Q9ULL5 1215 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 ADAMTS5Q9UNA0 930 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 RLFQ13129 1914 aa12.52□□□□□ -0.4
TRAPPC3-205ENST00000462715 A0A0G2JMZ2 1700 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 FKTNO75072 461 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 ERVK-9P63128 1117 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 DYNC1I2Q13409 638 aaKnown RBP12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 KIF22Q14807 665 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 PPP2R5BQ15173 497 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 CCDC181Q5TID7 509 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 TTBK2Q6IQ55 1244 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 TRIM74Q86UV6 250 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 TRIM73Q86UV7 250 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 FANCBQ8NB91 859 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 TSEN2Q8NCE0 465 aaKnown RBP12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 TSC22D3Q99576 134 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 RABEP2Q9H5N1 569 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 GDF3Q9NR23 364 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZFATQ9P243 1243 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 RBPJLQ9UBG7 517 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 CTNNAL1Q9UBT7 734 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 GUCA1BQ9UMX6 200 aa12.52□□□□□ -0.41
TRAPPC3-205ENST00000462715 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 B4DLN1 442 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 SKAP2O75563 359 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 CYLC1P35663 651 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 SLC16A2P36021 539 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 PEX19P40855 299 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 ATP1A2P50993 1020 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 MYO1EQ12965 1108 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 LAMB3Q13751 1172 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 ITIH4Q14624 930 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 ACCSLQ4AC99 568 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 AGBL2Q5U5Z8 902 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 SLC38A10Q9HBR0 1119 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 TMBIM4Q9HC24 238 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 SNX12Q9UMY4 172 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 REXO2Q9Y3B8 237 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZNF233A6NK53 670 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 HSPA8P11142 646 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 RXRAP19793 462 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 OAZ1P54368 228 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 CUL4BQ13620 913 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 PLS1Q14651 629 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 ARHGEF6Q15052 776 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 RTN1Q16799 776 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 SGSM1Q2NKQ1 1148 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 CCDC122Q5T0U0 273 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 RUFY4Q6ZNE9 571 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 STAG2Q8N3U4 1231 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 CCDC63Q8NA47 563 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 FAM81AQ8TBF8 368 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 RRP36Q96EU6 259 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 STAMBPL1Q96FJ0 436 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms