RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 EYA4O95677 639 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 CXCR5P32302 372 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 TUBA1BP68363 451 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 SEPT7Q16181 437 aaKnown RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 TUBA1AQ71U36 451 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 HS2ST1Q7LGA3 356 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 C14orf80Q86SX3 495 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 PLEKHO2Q8TD55 490 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 SKA1Q96BD8 255 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 DENND2DQ9H6A0 471 aaPredicted RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 NCOA5Q9HCD5 579 aaKnown RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 PAG1Q9NWQ8 432 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 AIPL1Q9NZN9 384 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 SEC63Q9UGP8 760 aaKnown RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 NCKAP5LQ9HCH0 1330 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 TTC34A8MYJ7 566 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 TRAFD1O14545 582 aaPredicted RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 RAD51CO43502 376 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 EIF2S1P05198 315 aaKnown RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 POLR2EP19388 210 aaKnown RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 ERVK-9P63128 1117 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 MKRN3Q13064 507 aaKnown RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 ARHGEF6Q15052 776 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 OTUD7BQ6GQQ9 843 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 CABP7Q86V35 215 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 NMD3Q96D46 503 aaKnown RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 DDX50Q9BQ39 737 aaKnown RBP11.57□□□□□ -0.56
LINC00342-202ENST00000448494 TLR10Q9BXR5 811 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 SLC7A5P2Q9GIP4 190 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 TLE6Q9H808 572 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 KLHL14Q9P2G3 628 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 UMODL1Q5DID0 1318 aa11.57□□□□□ -0.56
LINC00342-202ENST00000448494 SH3PXD2BA1X283 911 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 AGTP01019 485 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 GTF2H1P32780 548 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 UBXN1Q04323 297 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 SF3A3Q12874 501 aaKnown RBP eCLIP11.56□□□□□ -0.564e-6■■□□□ 11.7
LINC00342-202ENST00000448494 EIF2B5Q13144 721 aaKnown RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 NDUFA5Q16718 116 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 TMC3Q7Z5M5 1100 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 STARD8Q92502 1023 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 LRRC2Q9BYS8 371 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 NDEL1Q9GZM8 345 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 MTFR1LQ9H019 292 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 STMN4Q9H169 189 aaPredicted RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 VPS16Q9H269 839 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 GPHNQ9NQX3 736 aaPredicted RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 LRWD1Q9UFC0 647 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 TDRKHQ9Y2W6 561 aaKnown RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 CCDC169A6NNP5 214 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 TBKBP1A7MCY6 615 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 ENTPD5O75356 428 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 MOCS3O95396 460 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 COL6A2P12110 1019 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 STX17P56962 302 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 MAP3K10Q02779 954 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 RNASELQ05823 741 aaKnown RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 TRADDQ15628 312 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 TCP11X2Q5H9J9 407 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 SPDYAQ5MJ70 313 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 ZNF589Q86UQ0 364 aaPredicted RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 COL23A1Q86Y22 540 aaPredicted RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 FBXL16Q8N461 479 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 ZNF713Q8N859 430 aaPredicted RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 GRAMD1AQ96CP6 724 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 DNAJC1Q96KC8 554 aaKnown RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 TBC1D10AQ9BXI6 508 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 FHDC1Q9C0D6 1143 aaPredicted RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 STX18Q9P2W9 335 aaKnown RBP11.56□□□□□ -0.56
LINC00342-202ENST00000448494 ZNHIT2Q9UHR6 403 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 SERTAD1Q9UHV2 236 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 CASZ1Q86V15 1759 aa11.56□□□□□ -0.56
LINC00342-202ENST00000448494 DLC1Q96QB1 1528 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 PPP1R3GB7ZBB8 358 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 ZBED1O96006 694 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 NUDT17P0C025 328 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 PTPN2P17706 415 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 MARK3P27448 753 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 IL13P35225 146 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 IL23RQ5VWK5 629 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 MB21D1Q8N884 522 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 DYDC2Q96IM9 177 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 UIMC1Q96RL1 719 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 UBAC1Q9BSL1 405 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 FSD1Q9BTV5 496 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 CENPOQ9BU64 300 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 MKS1Q9NXB0 559 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 HNRNPCL1O60812 293 aaKnown RBP11.55□□□□□ -0.56
LINC00342-202ENST00000448494 CYP21A2P08686 494 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 TKTP29401 623 aaKnown RBP11.55□□□□□ -0.56
LINC00342-202ENST00000448494 CNGA2Q16280 664 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 ARL13BQ3SXY8 428 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 FAM209AQ5JX71 171 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 C4orf50Q6ZRC1 276 aa11.55□□□□□ -0.56
LINC00342-202ENST00000448494 INTS8Q75QN2 995 aaKnown RBP11.55□□□□□ -0.56
LINC00342-202ENST00000448494 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms