RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 PADI4Q9UM07 663 aa6.36□□□□□ -1.39
TM9SF3-202ENST00000443638 X6R8D5 127 aa6.36□□□□□ -1.39
TM9SF3-202ENST00000443638 RHPN2P1A8MT19 583 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 ELL2O00472 640 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 NCAM2O15394 837 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 MGEA5O60502 916 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 MYF5P13349 255 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 USP11P51784 963 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 LAPTM5Q13571 262 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 ZBTB41Q5SVQ8 909 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 INTS11Q5TA45 600 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 CYP2R1Q6VVX0 501 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 C1orf122Q6ZSJ8 110 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 MAATS1Q7Z4T9 603 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 PPM1NQ8N819 430 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 CCDC89Q8N998 374 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 NAXEQ8NCW5 288 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 UHMK1Q8TAS1 419 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 NSUN6Q8TEA1 469 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 FBLIM1Q8WUP2 373 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 AUTS2Q8WXX7 1259 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 RIN2Q8WYP3 895 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 ARL8AQ96BM9 186 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 APIPQ96GX9 242 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 FAM46AQ96IP4 442 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 CHAMP1Q96JM3 812 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 HEXIM2Q96MH2 286 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 ANO3Q9BYT9 981 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 EPB41L1Q9H4G0 881 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 ATP6V0A4Q9HBG4 840 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 CLIC5Q9NZA1 410 aa6.35□□□□□ -1.39
TM9SF3-202ENST00000443638 TMEM82A0PJX8 343 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 PRSS38A1L453 326 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 CCDC154A6NI56 674 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 hCG_1984214I3L0E3 225 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 IGF2BP3O00425 579 aaKnown RBP eCLIP6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 ADAMTS2O95450 1211 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 CNOT4O95628 575 aaKnown RBP6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 TSHRP16473 764 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 RPL17P18621 184 aaKnown RBP6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 MAPK9P45984 424 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 SLC16A1P53985 500 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 POU5F1Q01860 360 aaKnown RBP6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 DUSP4Q13115 394 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 ANO4Q32M45 955 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 SGO2Q562F6 1265 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 CCDC93Q567U6 631 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 FAM209BQ5JX69 171 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 CCDC62Q6P9F0 684 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 ESPNLQ6ZVH7 1005 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 TSPYL5Q86VY4 417 aaPredicted RBP6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 NME9Q86XW9 330 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 ANKRD18AQ8IVF6 992 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 TMEM52Q8NDY8 209 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 OR10H5Q8NGA6 315 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 KLHDC4Q8TBB5 520 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 PIP4K2CQ8TBX8 421 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 TBC1D20Q96BZ9 403 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 ERP27Q96DN0 273 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 TRIM11Q96F44 468 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 TMEM41AQ96HV5 264 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 MAML3Q96JK9 1138 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 YIPF2Q9BWQ6 316 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 TTLL2Q9BWV7 592 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 CD244Q9BZW8 370 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 KCTD10Q9H3F6 313 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 IFT122Q9HBG6 1241 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 RRN3Q9NYV6 651 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 KCNG1Q9UIX4 513 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 TCFL5Q9UL49 500 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 STXBP5LQ9Y2K9 1186 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 ATP23Q9Y6H3 246 aa6.34□□□□□ -1.39
TM9SF3-202ENST00000443638 A0A088AWK7 358 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 DYTNA2CJ06 578 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 NPHS1O60500 1241 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 SNX2O60749 519 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 FGF18O76093 207 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 C4BPAP04003 597 aaKnown RBP6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 LPLP06858 475 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 VEGFAP15692 232 aaPredicted RBP6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 FPR2P25090 351 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 EPHA5P54756 1037 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 PCBP3P57721 371 aaKnown RBP6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 ICA1Q05084 483 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 BLMHQ13867 455 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 GAB4Q2WGN9 574 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 C3orf36Q3SXR2 165 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 ZNF385CQ66K41 422 aaPredicted RBP6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 CEP68Q76N32 757 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 DAAM2Q86T65 1068 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 SUGP1Q8IWZ8 645 aaKnown RBP6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 NLGN4XQ8N0W4 816 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 MFSD4AQ8N468 514 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 RNF152Q8N8N0 203 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 NGDNQ8NEJ9 315 aaKnown RBP6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 PLBD2Q8NHP8 589 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 BRI3BPQ8WY22 251 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 CDK5RAP3Q96JB5 506 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms