RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 INSL6Q9Y581 213 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 SQORQ9Y6N5 450 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 IGKV6-21A0A0C4DH24 114 aa14.33□□□□□ -0.12
GPC1-204ENST00000426280 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
GPC1-204ENST00000426280 POU3F3P20264 500 aaPredicted RBP14.33□□□□□ -0.12
GPC1-204ENST00000426280 NLRP11P59045 1033 aaKnown RBP14.33□□□□□ -0.12
GPC1-204ENST00000426280 CTTNQ14247 550 aaKnown RBP14.33□□□□□ -0.12
GPC1-204ENST00000426280 KSR1Q8IVT5 923 aa14.33□□□□□ -0.12
GPC1-204ENST00000426280 RDM1Q8NG50 284 aa14.33□□□□□ -0.12
GPC1-204ENST00000426280 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
GPC1-204ENST00000426280 DYDC2Q96IM9 177 aa14.33□□□□□ -0.12
GPC1-204ENST00000426280 ZSCAN31Q96LW9 406 aaPredicted RBP14.33□□□□□ -0.12
GPC1-204ENST00000426280 MTMR9Q96QG7 549 aa14.33□□□□□ -0.12
GPC1-204ENST00000426280 LLPHQ9BRT6 129 aaKnown RBP14.33□□□□□ -0.12
GPC1-204ENST00000426280 TCEAL9Q9UHQ7 104 aa14.33□□□□□ -0.12
GPC1-204ENST00000426280 REV3LO60673 3130 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 TBX3O15119 743 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 RPS6KA5O75582 802 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 DGKIO75912 1065 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 SLITRK3O94933 977 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 IBSPP21815 317 aaPredicted RBP14.32□□□□□ -0.12
GPC1-204ENST00000426280 CRYBB1P53674 252 aaPredicted RBP14.32□□□□□ -0.12
GPC1-204ENST00000426280 PSMC5P62195 406 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 PAK2Q13177 524 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 DSC3Q14574 896 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 NBR1Q14596 966 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 EPHA7Q15375 998 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 XKR3Q5GH77 459 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 NCAPH2Q6IBW4 605 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 FBXO18Q8NFZ0 1043 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 C8orf76Q96K31 380 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 FAM167AQ96KS9 214 aa14.32□□□□□ -0.12
GPC1-204ENST00000426280 TGS1Q96RS0 853 aaKnown RBP14.32□□□□□ -0.12
GPC1-204ENST00000426280 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
GPC1-204ENST00000426280 MYH9P35579 1960 aaKnown RBP14.32□□□□□ -0.12
GPC1-204ENST00000426280 PRUNE2Q8WUY3 3088 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 M0QZ92 97 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 MAGEB2O15479 319 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 MAFO75444 373 aaPredicted RBP14.31□□□□□ -0.12
GPC1-204ENST00000426280 TXKP42681 527 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
GPC1-204ENST00000426280 TOB1P50616 345 aaPredicted RBP14.31□□□□□ -0.12
GPC1-204ENST00000426280 GPC3P51654 580 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 CYP4A11Q02928 519 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 ZNF174Q15697 407 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 EPC2Q52LR7 807 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 TMX3Q96JJ7 454 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 YME1L1Q96TA2 773 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 ADAM2Q99965 735 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 COL25A1Q9BXS0 654 aaPredicted RBP14.31□□□□□ -0.12
GPC1-204ENST00000426280 SH2B1Q9NRF2 756 aaPredicted RBP14.31□□□□□ -0.12
GPC1-204ENST00000426280 BMP2KQ9NSY1 1161 aaPredicted RBP14.31□□□□□ -0.12
GPC1-204ENST00000426280 HCSTQ9UBK5 93 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 CEP131Q9UPN4 1083 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 AKT3Q9Y243 479 aa14.31□□□□□ -0.12
GPC1-204ENST00000426280 COL4A4P53420 1690 aaPredicted RBP14.3□□□□□ -0.12
GPC1-204ENST00000426280 C9IYK1 514 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 P4HBP07237 508 aaKnown RBP14.3□□□□□ -0.12
GPC1-204ENST00000426280 MCM7P33993 719 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 TRIM29Q14134 588 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 FAM102BQ5T8I3 360 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 TMEM192Q8IY95 271 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 C4orf32Q8N8J7 132 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 HSD17B14Q9BPX1 270 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 EIF2AK1Q9BQI3 630 aaKnown RBP14.3□□□□□ -0.12
GPC1-204ENST00000426280 TTC12Q9H892 705 aaPredicted RBP14.3□□□□□ -0.12
GPC1-204ENST00000426280 BRMS1Q9HCU9 246 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 CYP26B1Q9NR63 512 aa14.3□□□□□ -0.12
GPC1-204ENST00000426280 A0A087WZ62 844 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 POTEMA6NI47 508 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 DLL1O00548 723 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 MARCH6O60337 910 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 RPLP2P05387 115 aaKnown RBP14.29□□□□□ -0.12
GPC1-204ENST00000426280 FAM189BP81408 668 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 TFF2Q03403 129 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 CALCRLQ16602 461 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 PAN2Q504Q3 1202 aaKnown RBP14.29□□□□□ -0.12
GPC1-204ENST00000426280 TPH2Q8IWU9 490 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 C4orf19Q8IY42 314 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 FBXO22Q8NEZ5 403 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 TMEM143Q96AN5 459 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 FDXACB1Q9BRP7 624 aaPredicted RBP14.29□□□□□ -0.12
GPC1-204ENST00000426280 LXNQ9BS40 222 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 RGS18Q9NS28 235 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 RNF19AQ9NV58 838 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 PCDHA12Q9UN75 941 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 MRPL42Q9Y6G3 142 aaKnown RBP14.29□□□□□ -0.12
GPC1-204ENST00000426280 TTC3P53804 2025 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 MYO9BQ13459 2157 aa14.29□□□□□ -0.12
GPC1-204ENST00000426280 NEMFO60524 1076 aa14.28□□□□□ -0.12
GPC1-204ENST00000426280 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
GPC1-204ENST00000426280 SPATA31C1P0DKV0 1188 aa14.28□□□□□ -0.12
GPC1-204ENST00000426280 DARSP14868 501 aaKnown RBP14.28□□□□□ -0.12
GPC1-204ENST00000426280 EIF4BP23588 611 aaKnown RBP14.28□□□□□ -0.12
GPC1-204ENST00000426280 FIBCD1Q8N539 461 aa14.28□□□□□ -0.12
GPC1-204ENST00000426280 CEP170P1Q96L14 293 aa14.28□□□□□ -0.12
GPC1-204ENST00000426280 NAP1L4Q99733 375 aaKnown RBP14.28□□□□□ -0.12
GPC1-204ENST00000426280 FTHL17Q9BXU8 183 aa14.28□□□□□ -0.12
GPC1-204ENST00000426280 FOXP1Q9H334 677 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms