RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 UBE2Q1Q7Z7E8 422 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 SYT2Q8N9I0 419 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-209ENST00000422933 SLC43A3Q8NBI5 491 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 CNNM3Q8NE01 707 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 DIS3LQ8TF46 1054 aaKnown RBP11.09□□□□□ -0.63
HDLBP-209ENST00000422933 LMBR1Q8WVP7 490 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 RAD54LQ92698 747 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 DPF3Q92784 378 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 DHX58Q96C10 678 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 CHAMP1Q96JM3 812 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 IFT74Q96LB3 600 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 SCLT1Q96NL6 688 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 MMTAG2Q9BU76 263 aaKnown RBP11.09□□□□□ -0.63
HDLBP-209ENST00000422933 PCDHA2Q9Y5H9 948 aa11.09□□□□□ -0.63
HDLBP-209ENST00000422933 EVI5O60447 810 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 USO1O60763 962 aaKnown RBP11.08□□□□□ -0.64
HDLBP-209ENST00000422933 CAND2O75155 1236 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 TBCAO75347 108 aaKnown RBP11.08□□□□□ -0.64
HDLBP-209ENST00000422933 MAFO75444 373 aaPredicted RBP11.08□□□□□ -0.64
HDLBP-209ENST00000422933 RARRES1P49788 294 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 CDK7P50613 346 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 NPEPPSP55786 919 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 FAM160A1Q05DH4 1040 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 TFDP1Q14186 410 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 MXD4Q14582 209 aaPredicted RBP11.08□□□□□ -0.64
HDLBP-209ENST00000422933 PPP2R5AQ15172 486 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 ODR4Q5SWX8 454 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 IER5Q5VY09 327 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 PLA2G4FQ68DD2 849 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 GDF6Q6KF10 455 aaPredicted RBP11.08□□□□□ -0.64
HDLBP-209ENST00000422933 USP49Q70CQ1 688 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 ANKRD33Q7Z3H0 272 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 GPBP1Q86WP2 473 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 CAGE1Q8TC20 777 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.64
HDLBP-209ENST00000422933 KIFAP3Q92845 792 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 DRC1Q96MC2 740 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 PNMA5Q96PV4 448 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 TNMDQ9H2S6 317 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 PRO3102Q9H379 93 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 TMEM39AQ9NV64 488 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 AKT3Q9Y243 479 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 NR2E3Q9Y5X4 410 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 MYH11P35749 1972 aa11.08□□□□□ -0.64
HDLBP-209ENST00000422933 ARID2Q68CP9 1835 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 LAMA3Q16787 3333 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 TREHO43280 583 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 ZNF202O95125 648 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 PARNO95453 639 aaKnown RBP11.07□□□□□ -0.64
HDLBP-209ENST00000422933 MBD3O95983 291 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 MYL1P05976 194 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 CLTBP09497 229 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 SLFN14P0C7P3 912 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 CYP11B2P19099 503 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 ABCD1P33897 745 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 MNX1P50219 401 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-209ENST00000422933 NDUFA8P51970 172 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 SMTNP53814 917 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 TLE2Q04725 743 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 MCM6Q14566 821 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 EMC2Q15006 297 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 SNX17Q15036 470 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 TARBP2Q15633 366 aaKnown RBP11.07□□□□□ -0.64
HDLBP-209ENST00000422933 ECM1Q16610 540 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 TRIM60Q495X7 471 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 FAM102BQ5T8I3 360 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 TRAPPC12Q8WVT3 735 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 INO80BQ9C086 356 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-209ENST00000422933 FAM49AQ9H0Q0 323 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-209ENST00000422933 PRDM5Q9NQX1 630 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-209ENST00000422933 WRAP73Q9P2S5 460 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-209ENST00000422933 GRIN2DO15399 1336 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 PHLPP2Q6ZVD8 1323 aa11.07□□□□□ -0.64
HDLBP-209ENST00000422933 FAM237AA0A1B0GTK4 181 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 MBLAC1A4D2B0 266 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-209ENST00000422933 H0YCG3 227 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 ZBTB39O15060 712 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 B4GALT4O60513 344 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 FAM13AO94988 1023 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 STBD1O95210 358 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 RAG1P15918 1043 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 THPOP40225 353 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 NCBP1Q09161 790 aaKnown RBP11.06□□□□□ -0.64
HDLBP-209ENST00000422933 LRRC26Q2I0M4 334 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 RINT1Q6NUQ1 792 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 CHRDL2Q6WN34 429 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 SERINC5Q86VE9 423 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 CCDC65Q8IXS2 484 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 FAM126BQ8IXS8 530 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 SLC17A8Q8NDX2 589 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 TIGD1Q96MW7 591 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 SH2D3AQ9BRG2 576 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 ZHX3Q9H4I2 956 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 DHX33Q9H6R0 707 aaKnown RBP11.06□□□□□ -0.64
HDLBP-209ENST00000422933 C17orf75Q9HAS0 396 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 TRMT13Q9NUP7 481 aaKnown RBP11.06□□□□□ -0.64
HDLBP-209ENST00000422933 LARSQ9P2J5 1176 aaKnown RBP11.06□□□□□ -0.64
HDLBP-209ENST00000422933 SUCLA2Q9P2R7 463 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-209ENST00000422933 SERTAD1Q9UHV2 236 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms