RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 CYP4F11Q9HBI6 524 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 ZNF212Q9UDV6 495 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 PDCLQ13371 301 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 INTS4Q96HW7 963 aaKnown RBP19.75■□□□□ 0.75
SHANK3-202ENST00000414786 ABCC4O15439 1325 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 VN1R5Q7Z5H4 357 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 USP33Q8TEY7 942 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 SCINQ9Y6U3 715 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 DCTN3O75935 186 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 KRT17Q04695 432 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 FBXO41Q8TF61 875 aa19.75■□□□□ 0.75
SHANK3-202ENST00000414786 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.75■□□□□ 0.75
SHANK3-202ENST00000414786 CDC37Q16543 378 aaPredicted RBP19.74■□□□□ 0.75
SHANK3-202ENST00000414786 DCUN1D1Q96GG9 259 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 MMP19Q99542 508 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 PPARGC1AQ9UBK2 798 aaKnown RBP19.74■□□□□ 0.75
SHANK3-202ENST00000414786 EPN1Q9Y6I3 576 aaPredicted RBP19.74■□□□□ 0.75
SHANK3-202ENST00000414786 LOC102724428A0A0B4J2F2 783 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 MEFVO15553 781 aaPredicted RBP19.74■□□□□ 0.75
SHANK3-202ENST00000414786 FOSP01100 380 aaPredicted RBP19.74■□□□□ 0.75
SHANK3-202ENST00000414786 SIK1P57059 783 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 KHDRBS2Q5VWX1 349 aaKnown RBP19.74■□□□□ 0.75
SHANK3-202ENST00000414786 XDHP47989 1333 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 NLRP11P59045 1033 aaKnown RBP19.74■□□□□ 0.75
SHANK3-202ENST00000414786 FAM213AQ9BRX8 229 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 HMGB1P1B2RPK0 211 aaPredicted RBP19.74■□□□□ 0.75
SHANK3-202ENST00000414786 MAN1C1Q9NR34 630 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 PNMA3Q9UL41 463 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 M0QYV0 167 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 SLFN14P0C7P3 912 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 ANKRD49Q8WVL7 239 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 KIAA1468Q9P260 1216 aa19.74■□□□□ 0.75
SHANK3-202ENST00000414786 IQANK1A0A1B0GTG1 560 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 TRIM32Q13049 653 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 GNAT1P11488 350 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 DHX9Q08211 1270 aaKnown RBP19.73■□□□□ 0.75
SHANK3-202ENST00000414786 CPVLQ9H3G5 476 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 SEL1LQ9UBV2 794 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 TRPM2O94759 1503 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 EIF3CLB5ME19 914 aaKnown RBP19.73■□□□□ 0.75
SHANK3-202ENST00000414786 GUCA1CO95843 209 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 PRAMEP78395 509 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 ARHGEF37A1IGU5 675 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 SGSM2O43147 1006 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 CARSP49589 748 aaKnown RBP19.73■□□□□ 0.75
SHANK3-202ENST00000414786 CUL1Q13616 776 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 ZNF699Q32M78 642 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 PRR23CQ6ZRP0 262 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 NUP93Q8N1F7 819 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 KCNV2Q8TDN2 545 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 ARL8AQ96BM9 186 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 VPS39Q96JC1 886 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 TRIM15Q9C019 465 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 TRIM45Q9H8W5 580 aaPredicted RBP19.73■□□□□ 0.75
SHANK3-202ENST00000414786 ZBTB40Q9NUA8 1239 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 SGO1Q5FBB7 561 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 PCDHA4Q9UN74 947 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 NOVA2Q9UNW9 492 aaKnown RBP19.73■□□□□ 0.75
SHANK3-202ENST00000414786 MFN1Q8IWA4 741 aa19.73■□□□□ 0.75
SHANK3-202ENST00000414786 GH2P01242 217 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 ATP11CQ8NB49 1132 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 NBNO60934 754 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 ZNF667Q5HYK9 610 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 MRPL47Q9HD33 250 aaKnown RBP19.72■□□□□ 0.75
SHANK3-202ENST00000414786 FAM217BQ9NTX9 383 aaPredicted RBP19.72■□□□□ 0.75
SHANK3-202ENST00000414786 TEX9Q8N6V9 391 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 ZBTB38Q8NAP3 1195 aaPredicted RBP19.72■□□□□ 0.75
SHANK3-202ENST00000414786 HSPA8P11142 646 aaKnown RBP19.72■□□□□ 0.75
SHANK3-202ENST00000414786 SEPT5Q99719 369 aaPredicted RBP19.72■□□□□ 0.75
SHANK3-202ENST00000414786 MCM8Q9UJA3 840 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 CTNND1O60716 968 aaKnown RBP19.72■□□□□ 0.75
SHANK3-202ENST00000414786 GTF2H3Q13889 308 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 MFSD14CQ5VZR4 134 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 EIF3CQ99613 913 aaKnown RBP19.72■□□□□ 0.75
SHANK3-202ENST00000414786 LZTS1Q9Y250 596 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 HSPA1AP0DMV8 641 aaKnown RBP19.72■□□□□ 0.75
SHANK3-202ENST00000414786 HSPA1BP0DMV9 641 aaKnown RBP19.72■□□□□ 0.75
SHANK3-202ENST00000414786 TTC8Q8TAM2 541 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 AGAP3Q96P47 875 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 RERGLQ9H628 205 aa19.72■□□□□ 0.75
SHANK3-202ENST00000414786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.71■□□□□ 0.75
SHANK3-202ENST00000414786 PRRG1O14668 218 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 SOAT1P35610 550 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 MXI1P50539 228 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 FASTKD1Q53R41 847 aaKnown RBP19.71■□□□□ 0.75
SHANK3-202ENST00000414786 MAP4P27816 1152 aaKnown RBP19.71■□□□□ 0.75
SHANK3-202ENST00000414786 HOXD10P28358 340 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 ST8SIA6P61647 398 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 SNRNP48Q6IEG0 339 aaKnown RBP19.71■□□□□ 0.75
SHANK3-202ENST00000414786 IFT140Q96RY7 1462 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 MYO1GB0I1T2 1018 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 ZBTB7BO15156 539 aaPredicted RBP19.71■□□□□ 0.75
SHANK3-202ENST00000414786 CLDN3O15551 220 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 CA4P22748 312 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 TSC22D1Q15714 1073 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 PARVGQ9HBI0 331 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 PPIEQ9UNP9 301 aaKnown RBP19.71■□□□□ 0.75
SHANK3-202ENST00000414786 PCSK7Q16549 785 aa19.71■□□□□ 0.75
SHANK3-202ENST00000414786 CRLF3Q8IUI8 442 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms