RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 FAM43BQ6ZT52 329 aaPredicted RBP12.57□□□□□ -0.4
RFFL-204ENST00000414419 EXOC8Q8IYI6 725 aa12.57□□□□□ -0.4
RFFL-204ENST00000414419 TBC1D32Q96NH3 1257 aa12.57□□□□□ -0.4
RFFL-204ENST00000414419 OSMRQ99650 979 aa12.57□□□□□ -0.4
RFFL-204ENST00000414419 JPH2Q9BR39 696 aaPredicted RBP12.57□□□□□ -0.4
RFFL-204ENST00000414419 TTC12Q9H892 705 aaPredicted RBP12.57□□□□□ -0.4
RFFL-204ENST00000414419 CDHR5Q9HBB8 845 aa12.57□□□□□ -0.4
RFFL-204ENST00000414419 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
RFFL-204ENST00000414419 MTUS1Q9ULD2 1270 aa12.57□□□□□ -0.4
RFFL-204ENST00000414419 NOL7Q9UMY1 257 aaKnown RBP12.57□□□□□ -0.4
RFFL-204ENST00000414419 PRRC2BQ5JSZ5 2229 aaKnown RBP12.56□□□□□ -0.4
RFFL-204ENST00000414419 DENND3A2RUS2 1198 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 RFXAPO00287 272 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 ARHGEF15O94989 841 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 STAG3L1P0CL83 205 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 MCM7P33993 719 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 CDC42EP1Q00587 391 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 ADGRE1Q14246 886 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 TARBP2Q15633 366 aaKnown RBP12.56□□□□□ -0.4
RFFL-204ENST00000414419 CCDC85BQ15834 202 aaPredicted RBP12.56□□□□□ -0.4
RFFL-204ENST00000414419 OTUD6AQ7L8S5 288 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 MICALL1Q8N3F8 863 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 CEP170P1Q96L14 293 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 SH2D3AQ9BRG2 576 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 ZSWIM4Q9H7M6 989 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 LRFN2Q9ULH4 789 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 NOC2LQ9Y3T9 749 aaKnown RBP12.56□□□□□ -0.4
RFFL-204ENST00000414419 CHD7Q9P2D1 2997 aa12.56□□□□□ -0.4
RFFL-204ENST00000414419 RALGAPA2Q2PPJ7 1873 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 TMEM150BA6NC51 233 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 GPR32O75388 356 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 IBSPP21815 317 aaPredicted RBP12.55□□□□□ -0.4
RFFL-204ENST00000414419 ERVK-21P61565 698 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 CYP4A11Q02928 519 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 ANO5Q75V66 913 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 NOSTRINQ8IVI9 506 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.55□□□□□ -0.4
RFFL-204ENST00000414419 TPH2Q8IWU9 490 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 C4orf19Q8IY42 314 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 FIBCD1Q8N539 461 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 LINC01465Q8N7H1 131 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
RFFL-204ENST00000414419 NLRP7Q8WX94 980 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 SLC7A3Q8WY07 619 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 DYDC2Q96IM9 177 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 CCDC43Q96MW1 224 aaKnown RBP12.55□□□□□ -0.4
RFFL-204ENST00000414419 SAMD11Q96NU1 681 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 LXNQ9BS40 222 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 TSPYL2Q9H2G4 693 aaPredicted RBP12.55□□□□□ -0.4
RFFL-204ENST00000414419 CYP26B1Q9NR63 512 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 ST3GAL5Q9UNP4 418 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 PPME1Q9Y570 386 aa12.55□□□□□ -0.4
RFFL-204ENST00000414419 MAFO75444 373 aaPredicted RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 STBD1O95210 358 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 ZSCAN20P17040 1043 aaPredicted RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 EIF4BP23588 611 aaKnown RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 YWHABP31946 246 aaKnown RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 TRAPPC10P48553 1259 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 GPC3P51654 580 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 POLGP54098 1239 aaPredicted RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 GRB10Q13322 594 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 ORC2Q13416 577 aaPredicted RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 CTTNQ14247 550 aaKnown RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 ZNF174Q15697 407 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 PLA2G4FQ68DD2 849 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 NPAS4Q8IUM7 802 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 FBXO22Q8NEZ5 403 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 NEK9Q8TD19 979 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 TMEM40Q8WWA1 233 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 ZNF668Q96K58 619 aaPredicted RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 ADAM2Q99965 735 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 EIF2AK1Q9BQI3 630 aaKnown RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 GCOM2Q9BZD3 368 aaPredicted RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 ERVK-5Q9HDB9 667 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 C1orf112Q9NSG2 853 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 RGL1Q9NZL6 768 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 SUCLA2Q9P2R7 463 aaPredicted RBP12.54□□□□□ -0.4
RFFL-204ENST00000414419 PCDHB7Q9Y5E2 793 aa12.54□□□□□ -0.4
RFFL-204ENST00000414419 ARID2Q68CP9 1835 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 TRANK1O15050 2925 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 IGKV6-21A0A0C4DH24 114 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 EPOPA6NHQ4 379 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 H3BQV1 296 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 WNT7AO00755 349 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 POU3F3P20264 500 aaPredicted RBP12.53□□□□□ -0.4
RFFL-204ENST00000414419 RFC5P40937 340 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 NPEPPSP55786 919 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 SPIRE1Q08AE8 756 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 BTG3Q14201 252 aaPredicted RBP12.53□□□□□ -0.4
RFFL-204ENST00000414419 SKIV2LQ15477 1246 aaKnown RBP12.53□□□□□ -0.4
RFFL-204ENST00000414419 XKR9Q5GH70 373 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 TTC38Q5R3I4 469 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 SPRED2Q7Z698 418 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 FAM228AQ86W67 206 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 RHPN2Q8IUC4 686 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 GDPD5Q8WTR4 605 aa12.53□□□□□ -0.4
RFFL-204ENST00000414419 LINC01599Q8WXQ3 324 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms