RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 FERMT2Q96AC1 680 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 C8orf48Q96LL4 319 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 CNTD2Q9H8S5 307 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 KCNK12Q9HB15 430 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 DNAJC28Q9NX36 388 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 GALNT8Q9NY28 637 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.73□□□□□ -1.33
LSM5-206ENST00000409987 MBD1Q9UIS9 605 aaPredicted RBP6.73□□□□□ -1.33
LSM5-206ENST00000409987 KCNG1Q9UIX4 513 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 TMPRSS11EQ9UL52 423 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 NOB1Q9ULX3 412 aaKnown RBP6.73□□□□□ -1.33
LSM5-206ENST00000409987 EDARQ9UNE0 448 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 MRFAP1Q9Y605 127 aa6.73□□□□□ -1.33
LSM5-206ENST00000409987 KLHL33A6NCF5 533 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 PRPF3O43395 683 aaKnown RBP6.72□□□□□ -1.33
LSM5-206ENST00000409987 MAP4K4O95819 1239 aaPredicted RBP6.72□□□□□ -1.33
LSM5-206ENST00000409987 LPLP06858 475 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 MTNR1BP49286 362 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 HTRA3P83110 453 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 ADCY2Q08462 1091 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 UGT8Q16880 541 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 SKIDA1Q1XH10 827 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 FAM102BQ5T8I3 360 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 PRR23BQ6ZRT6 265 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 KCNK18Q7Z418 384 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 LYSMD2Q8IV50 215 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 CMTR2Q8IYT2 770 aaKnown RBP6.72□□□□□ -1.33
LSM5-206ENST00000409987 MYO1HQ8N1T3 1032 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 SMARCC2Q8TAQ2 1214 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 IGDCC4Q8TDY8 1250 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 ZNF526Q8TF50 670 aaPredicted RBP6.72□□□□□ -1.33
LSM5-206ENST00000409987 JADE3Q92613 823 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 DIRC2Q96SL1 478 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 NSUN3Q9H649 340 aaKnown RBP6.72□□□□□ -1.33
LSM5-206ENST00000409987 ZNF277Q9NRM2 450 aaPredicted RBP6.72□□□□□ -1.33
LSM5-206ENST00000409987 SIRT5Q9NXA8 310 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 PCDHA5Q9Y5H7 936 aa6.72□□□□□ -1.33
LSM5-206ENST00000409987 PEX10O60683 326 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 JUNBP17275 347 aaPredicted RBP6.71□□□□□ -1.34
LSM5-206ENST00000409987 ECE1P42892 770 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 TRIM25Q14258 630 aaKnown RBP6.71□□□□□ -1.34
LSM5-206ENST00000409987 NOLC1Q14978 699 aaKnown RBP eCLIP6.71□□□□□ -1.34
LSM5-206ENST00000409987 ACAP2Q15057 778 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 PHF19Q5T6S3 580 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 C14orf80Q86SX3 495 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 TPH2Q8IWU9 490 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 TCEAL8Q8IYN2 117 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 CALML6Q8TD86 181 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 MORC4Q8TE76 937 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 TEKT5Q96M29 485 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 MCOLN1Q9GZU1 580 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 WNT8AQ9H1J5 351 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 EPB41L4BQ9H329 900 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 DLL4Q9NR61 685 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 INVSQ9Y283 1065 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 GPR45Q9Y5Y3 372 aa6.71□□□□□ -1.34
LSM5-206ENST00000409987 ZRANB2O95218 330 aaKnown RBP eCLIP6.7□□□□□ -1.34
LSM5-206ENST00000409987 IL18BPO95998 194 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 PFKMP08237 780 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 CYP2C8P10632 490 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 PF4V1P10720 104 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 OSMP13725 252 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 AGXTP21549 392 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 IGFBP6P24592 240 aaPredicted RBP6.7□□□□□ -1.34
LSM5-206ENST00000409987 ITGA1P56199 1179 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 MLC1Q15049 377 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 TARBP2Q15633 366 aaKnown RBP6.7□□□□□ -1.34
LSM5-206ENST00000409987 EFCAB2Q5VUJ9 269 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 NXNQ6DKJ4 435 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 B3GNT8Q7Z7M8 397 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 STK32CQ86UX6 486 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 IGDCC3Q8IVU1 814 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 TMEM209Q96SK2 561 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 GORASP1Q9BQQ3 440 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 OR10A5Q9H207 317 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 KCTD10Q9H3F6 313 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 DCP1AQ9NPI6 582 aaPredicted RBP6.7□□□□□ -1.34
LSM5-206ENST00000409987 ANKRD6Q9Y2G4 727 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 GIT1Q9Y2X7 761 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 NUMBLQ9Y6R0 609 aa6.7□□□□□ -1.34
LSM5-206ENST00000409987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.7□□□□□ -1.34
LSM5-206ENST00000409987 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 TEX51A0A1B0GUA7 166 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 PEX14O75381 377 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 CELA3BP08861 270 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 CT47B1P0C2W7 299 aaPredicted RBP6.69□□□□□ -1.34
LSM5-206ENST00000409987 GLRBP48167 497 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 EPHB3P54753 998 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 IL13RA1P78552 427 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 MRPS9P82933 396 aaKnown RBP6.69□□□□□ -1.34
LSM5-206ENST00000409987 ADAM9Q13443 819 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 TCIRG1Q13488 830 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 RTP5Q14D33 572 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 STILQ15468 1287 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 KANK2Q63ZY3 851 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 NBPF11Q86T75 865 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 SLC41A1Q8IVJ1 513 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 MAGEB6Q8N7X4 407 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 TTC8Q8TAM2 541 aa6.69□□□□□ -1.34
LSM5-206ENST00000409987 MZB1Q8WU39 189 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms