RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CLP1Q92989 425 aaKnown RBP16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 HLA-CQ95604 372 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 GTF3C6Q969F1 213 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 MRPL38Q96DV4 380 aaKnown RBP16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 AIFM3Q96NN9 605 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 JPH2Q9BR39 696 aaPredicted RBP16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 KCNJ14Q9UNX9 436 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 PPME1Q9Y570 386 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 PTPRSQ13332 1948 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 NCK2O43639 380 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 BAG4O95429 457 aaKnown RBP16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 CTDNEP1O95476 244 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 BMPR1AP36894 532 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 DNM2P50570 870 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 NFX1Q12986 1120 aaKnown RBP16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 PPP2R5CQ13362 524 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 ME3Q16798 604 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 INF2Q27J81 1249 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 LETM2Q2VYF4 491 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 EFCAB12Q6NXP0 572 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 SLC24A5Q71RS6 500 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 RTN4RL1Q86UN2 441 aaPredicted RBP16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 SLFN12Q8IYM2 578 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 ZBTB10Q96DT7 871 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 C17orf80Q9BSJ5 609 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 C11orf84Q9BUA3 381 aaPredicted RBP16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 LMAN2LQ9H0V9 348 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 UNC45AQ9H3U1 944 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 RGS18Q9NS28 235 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 MTUS1Q9ULD2 1270 aa16.36■□□□□ 0.21
NIF3L1-205ENST00000409588 MYH9P35579 1960 aaKnown RBP16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 ZNF862O60290 1169 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 GPR32O75388 356 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 TDP2O95551 362 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 KRT2P35908 639 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 SARSP49591 514 aaKnown RBP16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 PSMC5P62195 406 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 PRKCEQ02156 737 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 TBC1D8BQ0IIM8 1120 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 GPM6BQ13491 265 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 TRIM29Q14134 588 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 BTG3Q14201 252 aaPredicted RBP16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 CMTR2Q8IYT2 770 aaKnown RBP16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 UIMC1Q96RL1 719 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 ELAC1Q9H777 363 aaKnown RBP16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 RC3H2Q9HBD1 1191 aaKnown RBP16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 ERVK-5Q9HDB9 667 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 KCNMB3Q9NPA1 279 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 LRFN2Q9ULH4 789 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 ST3GAL5Q9UNP4 418 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 LIMCH1Q9UPQ0 1083 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 PCDHB7Q9Y5E2 793 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 ADGRA3Q8IWK6 1321 aa16.35■□□□□ 0.21
NIF3L1-205ENST00000409588 DENND3A2RUS2 1198 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 CHMP2AO43633 222 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 MARCH6O60337 910 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 CCNT1O60563 726 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 P4HBP07237 508 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 FDPSP14324 419 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 EIF4BP23588 611 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 FAM189BP81408 668 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 TARBP2Q15633 366 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 TIGD5Q53EQ6 642 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 PIK3AP1Q6ZUJ8 805 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 LINC01465Q8N7H1 131 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 GDPD5Q8WTR4 605 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 P2RX5Q93086 422 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 ZSCAN31Q96LW9 406 aaPredicted RBP16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 LLPHQ9BRT6 129 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 PRDM6Q9NQX0 595 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 GINS2Q9Y248 185 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 NOC2LQ9Y3T9 749 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 TTC3P53804 2025 aa16.34■□□□□ 0.21
NIF3L1-205ENST00000409588 PRRC2BQ5JSZ5 2229 aaKnown RBP16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 BMP1P13497 986 aa16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 ZSCAN20P17040 1043 aaPredicted RBP16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 QARSP47897 775 aaKnown RBP16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 NLRP11P59045 1033 aaKnown RBP16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 KIZQ2M2Z5 673 aa16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 TRMT1LQ7Z2T5 733 aaKnown RBP16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 RSPH1Q8WYR4 309 aa16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 INO80BQ9C086 356 aaPredicted RBP16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 CDHR5Q9HBB8 845 aa16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 AKT3Q9Y243 479 aa16.33■□□□□ 0.2
NIF3L1-205ENST00000409588 VCANP13611 3396 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 IGKV6-21A0A0C4DH24 114 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 HOXA2O43364 376 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 MMP1P03956 469 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 EPHA7Q15375 998 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 PUS10Q3MIT2 529 aaKnown RBP16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 OTUD6AQ7L8S5 288 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 SPRED2Q7Z698 418 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 NSUN7Q8NE18 718 aaKnown RBP16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 LINC01599Q8WXQ3 324 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 ADAM2Q99965 735 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 ADAMTS10Q9H324 1103 aa16.32■□□□□ 0.2
NIF3L1-205ENST00000409588 AAASQ9NRG9 546 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms