RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 MCTP2Q6DN12 878 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 FAM43BQ6ZT52 329 aaPredicted RBP19.04■□□□□ 0.64
CHMP3-203ENST00000409225 TDRD5Q8NAT2 981 aaKnown RBP19.04■□□□□ 0.64
CHMP3-203ENST00000409225 CASD1Q96PB1 797 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 LZTS2Q9BRK4 669 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 ELAC1Q9H777 363 aaKnown RBP19.04■□□□□ 0.64
CHMP3-203ENST00000409225 LY9Q9HBG7 655 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 LIMD1Q9UGP4 676 aa19.04■□□□□ 0.64
CHMP3-203ENST00000409225 BACH1O14867 736 aa19.03■□□□□ 0.64
CHMP3-203ENST00000409225 HBP1O60381 514 aa19.03■□□□□ 0.64
CHMP3-203ENST00000409225 ARP10275 920 aa19.03■□□□□ 0.64
CHMP3-203ENST00000409225 PPM1AP35813 382 aa19.03■□□□□ 0.64
CHMP3-203ENST00000409225 MTHFRP42898 656 aa19.03■□□□□ 0.64
CHMP3-203ENST00000409225 ITGB3BPQ13352 177 aaPredicted RBP19.03■□□□□ 0.64
CHMP3-203ENST00000409225 SMC1AQ14683 1233 aaKnown RBP19.03■□□□□ 0.64
CHMP3-203ENST00000409225 RARS2Q5T160 578 aaKnown RBP19.03■□□□□ 0.64
CHMP3-203ENST00000409225 FLCNQ8NFG4 579 aa19.03■□□□□ 0.64
CHMP3-203ENST00000409225 RWDD1Q9H446 243 aaPredicted RBP19.03■□□□□ 0.64
CHMP3-203ENST00000409225 RNF19AQ9NV58 838 aa19.03■□□□□ 0.64
CHMP3-203ENST00000409225 SPG21Q9NZD8 308 aa19.03■□□□□ 0.64
CHMP3-203ENST00000409225 C2orf71A6NGG8 1288 aa19.02■□□□□ 0.64
CHMP3-203ENST00000409225 DDX39AO00148 427 aaKnown RBP19.02■□□□□ 0.64
CHMP3-203ENST00000409225 CLASP2O75122 1294 aaKnown RBP19.02■□□□□ 0.64
CHMP3-203ENST00000409225 RXRAP19793 462 aa19.02■□□□□ 0.64
CHMP3-203ENST00000409225 GNAQP50148 359 aa19.02■□□□□ 0.64
CHMP3-203ENST00000409225 SLC26A2P50443 739 aa19.02■□□□□ 0.64
CHMP3-203ENST00000409225 CLCN5P51795 746 aa19.02■□□□□ 0.64
CHMP3-203ENST00000409225 CRYBB1P53674 252 aaPredicted RBP19.02■□□□□ 0.64
CHMP3-203ENST00000409225 DSC3Q14574 896 aa19.02■□□□□ 0.64
CHMP3-203ENST00000409225 MB21D2Q8IYB1 491 aaPredicted RBP19.02■□□□□ 0.64
CHMP3-203ENST00000409225 ABI1Q8IZP0 508 aa19.02■□□□□ 0.64
CHMP3-203ENST00000409225 LRRC43Q8N309 656 aa19.02■□□□□ 0.64
CHMP3-203ENST00000409225 C12orf76Q8N812 135 aaPredicted RBP19.02■□□□□ 0.64
CHMP3-203ENST00000409225 VPS13AQ96RL7 3174 aa19.02■□□□□ 0.64
CHMP3-203ENST00000409225 HOXA2O43364 376 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 ATG7O95352 703 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 VTNP04004 478 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 FAM160B1Q5W0V3 765 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 CWF19L1Q69YN2 538 aaKnown RBP19.01■□□□□ 0.63
CHMP3-203ENST00000409225 KANK3Q6NY19 840 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 NFXL1Q6ZNB6 911 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 HEATR3Q7Z4Q2 680 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 ZDHHC14Q8IZN3 488 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 CCDC82Q8N4S0 544 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 MRPL43Q8N983 215 aaKnown RBP19.01■□□□□ 0.63
CHMP3-203ENST00000409225 RNF169Q8NCN4 708 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 PGBD1Q96JS3 809 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 AGO4Q9HCK5 861 aaKnown RBP19.01■□□□□ 0.63
CHMP3-203ENST00000409225 DBR1Q9UK59 544 aaKnown RBP19.01■□□□□ 0.63
CHMP3-203ENST00000409225 DCHS1Q96JQ0 3298 aa19.01■□□□□ 0.63
CHMP3-203ENST00000409225 CCNE2O96020 404 aa19■□□□□ 0.63
CHMP3-203ENST00000409225 IGHDP01880 384 aa19■□□□□ 0.63
CHMP3-203ENST00000409225 ZNF484Q5JVG2 852 aa19■□□□□ 0.63
CHMP3-203ENST00000409225 RAB11FIP4Q86YS3 637 aa19■□□□□ 0.63
CHMP3-203ENST00000409225 CCDC60Q8IWA6 550 aaPredicted RBP19■□□□□ 0.63
CHMP3-203ENST00000409225 METTL13Q8N6R0 699 aa19■□□□□ 0.63
CHMP3-203ENST00000409225 COL1A2P08123 1366 aa19■□□□□ 0.63
CHMP3-203ENST00000409225 GVINP1Q7Z2Y8 2422 aa19■□□□□ 0.63
CHMP3-203ENST00000409225 EVPLQ92817 2033 aa19■□□□□ 0.63
CHMP3-203ENST00000409225 IGKV6D-21A0A0A0MT36 114 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 ZBTB42B2RXF5 422 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 GPR32O75388 356 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 CEP55Q53EZ4 464 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 KIAA1841Q6NSI8 718 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 PDXDC2PQ6P474 469 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 CASC1Q6TDU7 716 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 ABHD15Q6UXT9 468 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 SLC39A11Q8N1S5 342 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 PLCD3Q8N3E9 789 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 ZNF302Q9NR11 478 aa18.99■□□□□ 0.63
CHMP3-203ENST00000409225 CCDC69A6NI79 296 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 NT5C1B-RDH14C9J2C7 533 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 PI15O43692 258 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 C22orf31O95567 290 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 CXCL14O95715 111 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 ZSCAN20P17040 1043 aaPredicted RBP18.98■□□□□ 0.63
CHMP3-203ENST00000409225 METAP2P50579 478 aaKnown RBP eCLIP18.98■□□□□ 0.63
CHMP3-203ENST00000409225 CLLU1OSQ5K130 101 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 ATAT1Q5SQI0 421 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 TRMT1LQ7Z2T5 733 aaKnown RBP18.98■□□□□ 0.63
CHMP3-203ENST00000409225 ECHDC2Q86YB7 292 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 CKAP2LQ8IYA6 745 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 AUTS2Q8WXX7 1259 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 DZANK1Q9NVP4 752 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 CACNA1AO00555 2505 aa18.98■□□□□ 0.63
CHMP3-203ENST00000409225 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.97■□□□□ 0.63
CHMP3-203ENST00000409225 PRC1O43663 620 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 EOMESO95936 686 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 EPCAMP16422 314 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 AOC1P19801 751 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 ATP4AP20648 1035 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 BMS1Q14692 1282 aaKnown RBP18.97■□□□□ 0.63
CHMP3-203ENST00000409225 ANGPT1Q15389 498 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 SWSAP1Q6NVH7 229 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 CCDC105Q8IYK2 499 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 TMEM87AQ8NBN3 555 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 FEZF2Q8TBJ5 459 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 HELQQ8TDG4 1101 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 RUFY2Q8WXA3 655 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 CYP26B1Q9NR63 512 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms