RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 IFI16Q16666 785 aaKnown RBP18.3■□□□□ 0.52
SYNC-202ENST00000409190 FAM186BQ8IYM0 893 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 RUBCNQ92622 972 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 PBKQ96KB5 322 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 DBNDD1Q9H9R9 158 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 DNAJC12Q9UKB3 198 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 ATMINO43313 823 aaPredicted RBP18.3■□□□□ 0.52
SYNC-202ENST00000409190 HLA-DOAP06340 250 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 E2F5Q15329 346 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 ERMNQ8TAM6 284 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 CTNNBL1Q8WYA6 563 aaPredicted RBP18.3■□□□□ 0.52
SYNC-202ENST00000409190 RAPGEF5Q92565 580 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
SYNC-202ENST00000409190 PLCB1Q9NQ66 1216 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 DNAJC17Q9NVM6 304 aaKnown RBP18.3■□□□□ 0.52
SYNC-202ENST00000409190 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 CAND2O75155 1236 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 GCFC2P16383 781 aaKnown RBP18.3■□□□□ 0.52
SYNC-202ENST00000409190 ORC2Q13416 577 aaPredicted RBP18.3■□□□□ 0.52
SYNC-202ENST00000409190 ZYXQ15942 572 aaKnown RBP18.3■□□□□ 0.52
SYNC-202ENST00000409190 CCDC26Q8TAB7 109 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 THAP2Q9H0W7 228 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 HAUS2Q9NVX0 235 aa18.3■□□□□ 0.52
SYNC-202ENST00000409190 ASTN1O14525 1302 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 TISP43B9A030 160 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 hCG_1984214I3L0E3 225 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 MEIS2O14770 477 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 SMARCA1P28370 1054 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 GABPAQ06546 454 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 GPATCH4Q5T3I0 446 aaKnown RBP18.29■□□□□ 0.52
SYNC-202ENST00000409190 CDC42EP5Q6NZY7 148 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 NT5DC3Q86UY8 548 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 ARFGAP2Q8N6H7 521 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 ZNF713Q8N859 430 aaPredicted RBP18.29■□□□□ 0.52
SYNC-202ENST00000409190 MGARPQ8TDB4 240 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 MLXIPLQ9NP71 852 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 COL22A1Q8NFW1 1626 aaPredicted RBP18.29■□□□□ 0.52
SYNC-202ENST00000409190 CTNND1O60716 968 aaKnown RBP18.29■□□□□ 0.52
SYNC-202ENST00000409190 SNHG28P0DPA3 235 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 MARCKSL1P49006 195 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 CDR1P51861 262 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 PPP2R2AP63151 447 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 ADCY1Q08828 1119 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 FMO2Q99518 471 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 KCNMB3Q9NPA1 279 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 ZBTB21Q9ULJ3 1066 aa18.29■□□□□ 0.52
SYNC-202ENST00000409190 CUL1Q13616 776 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 EDRF1Q3B7T1 1238 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 CBWD6Q4V339 395 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 CBWD3Q5JTY5 395 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 CBWD5Q5RIA9 395 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 CPNE8Q86YQ8 564 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 HOOK2Q96ED9 719 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 TMEM59LQ9UK28 342 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 IL1R1P14778 569 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 TMC3Q7Z5M5 1100 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 FRMD5Q7Z6J6 570 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 PHLDB2Q86SQ0 1253 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 SYCP3Q8IZU3 236 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 MREGQ8N565 214 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 SIX2Q9NPC8 291 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 UTRNP46939 3433 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 H0YGN5 161 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 OPLAHO14841 1288 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 MSH4O15457 936 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 TNFAIP3P21580 790 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 FNTAP49354 379 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 RUFY4Q6ZNE9 571 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 EIF2AK1Q9BQI3 630 aaKnown RBP18.28■□□□□ 0.52
SYNC-202ENST00000409190 CTTNBP2NLQ9P2B4 639 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 NFS1Q9Y697 457 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 MYH4Q9Y623 1939 aa18.28■□□□□ 0.52
SYNC-202ENST00000409190 RPL13P26373 211 aaKnown RBP18.27■□□□□ 0.52
SYNC-202ENST00000409190 CERKLQ49MI3 558 aaPredicted RBP18.27■□□□□ 0.52
SYNC-202ENST00000409190 OTUD6AQ7L8S5 288 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 BANK1Q8NDB2 785 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 ACTRT1Q8TDG2 376 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 SLC20A1Q8WUM9 679 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 C18orf8Q96DM3 657 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 RBM17Q96I25 401 aaKnown RBP18.27■□□□□ 0.52
SYNC-202ENST00000409190 BTBD6Q96KE9 485 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
SYNC-202ENST00000409190 DDTLA6NHG4 134 aaPredicted RBP18.27■□□□□ 0.52
SYNC-202ENST00000409190 FOXO6A8MYZ6 492 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 FGFR4P22455 802 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 DR1Q01658 176 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 CCDC174Q6PII3 467 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 TBC1D22AQ8WUA7 517 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 LMBR1Q8WVP7 490 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 DYDC2Q96IM9 177 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 SEC16BQ96JE7 1060 aa18.27■□□□□ 0.52
SYNC-202ENST00000409190 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.27■□□□□ 0.52
SYNC-202ENST00000409190 DDX60LQ5H9U9 1706 aaKnown RBP18.27■□□□□ 0.51
SYNC-202ENST00000409190 DNM1LO00429 736 aa18.27■□□□□ 0.51
SYNC-202ENST00000409190 RDXP35241 583 aaKnown RBP18.27■□□□□ 0.51
SYNC-202ENST00000409190 KCNJ1P48048 391 aa18.27■□□□□ 0.51
SYNC-202ENST00000409190 MESDQ14696 234 aa18.27■□□□□ 0.51
SYNC-202ENST00000409190 DCAF12L1Q5VU92 463 aa18.27■□□□□ 0.51
SYNC-202ENST00000409190 SLFN12Q8IYM2 578 aa18.27■□□□□ 0.51
SYNC-202ENST00000409190 SYT2Q8N9I0 419 aaPredicted RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms