RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TYW1Q9NV66 732 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 TAS2R14Q9NYV8 317 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 PRR12Q9ULL5 1215 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 MAGOHP61326 146 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 MAGOHBQ96A72 148 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 NAP1L4Q99733 375 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 GANQ9H2C0 597 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 NR2E1Q9Y466 385 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 DDX3XO00571 662 aaKnown RBP eCLIP13.76□□□□□ -0.215e-13■■■■■ 40.6
PPP4R1-202ENST00000400555 CALCAP01258 141 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 POLR2MP0CAP2 368 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 LSP1P33241 339 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 HSD17B3P37058 310 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 CORO7P57737 925 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 MYL7Q01449 175 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 TRIP13Q15645 432 aaPredicted RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 IRF2BP2Q7Z5L9 587 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 SYT2Q8N9I0 419 aaPredicted RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 TPCN2Q8NHX9 752 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 MRRFQ96E11 262 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 BTBD6Q96KE9 485 aa13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 METTL14Q9HCE5 456 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-202ENST00000400555 GOLGA6L10A0A0M3HER8 536 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 PJA2O43164 708 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 ECE2O60344 883 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 ALAS1P13196 640 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 KRT5P13647 590 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 PRLRP16471 622 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 HDLBPQ00341 1268 aaKnown RBP13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 C2CD6Q53TS8 623 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 DYDC1Q8WWB3 177 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 LRRC45Q96CN5 670 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 PRMT6Q96LA8 375 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 CCDC114Q96M63 670 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 MLXIPLQ9NP71 852 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 MYO1FO00160 1098 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 PPIP5K2O43314 1243 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 STAT2P52630 851 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 SETQ01105 290 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 EPC2Q52LR7 807 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 SLC35C1Q96A29 364 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 EDEM3Q9BZQ6 932 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 PPP1R9AQ9ULJ8 1098 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 IRS2Q9Y4H2 1338 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 ARP10275 920 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 DLATP10515 647 aaKnown RBP13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 JAG1P78504 1218 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 SEMA3FQ13275 785 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 ORC2Q13416 577 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 CCDC38Q502W7 563 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 FRMD5Q7Z6J6 570 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 PALB2Q86YC2 1186 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 CCDC105Q8IYK2 499 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 CABS1Q96KC9 395 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 ATP6V1G3Q96LB4 118 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.212e-13■■■■□ 22.1
PPP4R1-202ENST00000400555 THAP2Q9H0W7 228 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 GLT8D2Q9H1C3 349 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 BCORQ6W2J9 1755 aa13.75□□□□□ -0.21
PPP4R1-202ENST00000400555 A0A1W2PRG0 241 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 KCNJ1P48048 391 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 CETN1Q12798 172 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 CBWD6Q4V339 395 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 CBWD3Q5JTY5 395 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 CBWD5Q5RIA9 395 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 PPP1R18Q6NYC8 613 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 SLC20A1Q8WUM9 679 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 NEUROG2Q9H2A3 272 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 ZC3H4Q9UPT8 1303 aaKnown RBP13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 FOXN3O00409 490 aaPredicted RBP13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 PDXKO00764 312 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 SNHG28P0DPA3 235 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 OTUD6AQ7L8S5 288 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 KCNMB3Q9NPA1 279 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 FAM198AQ9UFP1 575 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 LRP5O75197 1615 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 DDX60Q8IY21 1712 aaKnown RBP13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 A0A087WUV0 522 aaPredicted RBP13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 APBA3O96018 575 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 FERP16591 822 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 MAP2K1Q02750 393 aaPredicted RBP13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 EDRF1Q3B7T1 1238 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 GLE1Q53GS7 698 aaKnown RBP13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 ZNF662Q6ZS27 426 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 CCDC121Q6ZUS5 278 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 MIER3Q7Z3K6 550 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 CEP57Q86XR8 500 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 KAT5Q92993 513 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 ARHGEF26Q96DR7 871 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 SAAL1Q96ER3 474 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 CRAMP1Q96RY5 1269 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 CCT8L2Q96SF2 557 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms