RNA–Protein interactions for RNA: ENST00000398809.8

CDH23-205, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-205ENST00000398809 GPC5P78333 572 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 ORC2Q13416 577 aaPredicted RBP18.5■□□□□ 0.55
CDH23-205ENST00000398809 C6orf118Q5T5N4 469 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 PDZD4Q76G19 769 aaPredicted RBP18.5■□□□□ 0.55
CDH23-205ENST00000398809 ARMC9Q7Z3E5 817 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 JPH2Q9BR39 696 aaPredicted RBP18.5■□□□□ 0.55
CDH23-205ENST00000398809 NUF2Q9BZD4 464 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 MT-ND3P03897 115 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 RPS6KA2Q15349 733 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 PPP1R18Q6NYC8 613 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 PDXDC1Q6P996 788 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 DARS2Q6PI48 645 aaKnown RBP18.5■□□□□ 0.55
CDH23-205ENST00000398809 ZNF512BQ96KM6 892 aaPredicted RBP18.5■□□□□ 0.55
CDH23-205ENST00000398809 LRRC1Q9BTT6 524 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 ABCB11O95342 1321 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 ACTN1P12814 892 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 RPUSD2Q8IZ73 545 aaKnown RBP18.5■□□□□ 0.55
CDH23-205ENST00000398809 MARCH10Q8NA82 808 aaPredicted RBP18.5■□□□□ 0.55
CDH23-205ENST00000398809 NUB1Q9Y5A7 615 aa18.5■□□□□ 0.55
CDH23-205ENST00000398809 SALL3Q9BXA9 1300 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 PODXLO00592 558 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 FTLP02792 175 aaPredicted RBP18.49■□□□□ 0.55
CDH23-205ENST00000398809 MAGOHP61326 146 aaKnown RBP18.49■□□□□ 0.55
CDH23-205ENST00000398809 SF3B3Q15393 1217 aaKnown RBP18.49■□□□□ 0.55
CDH23-205ENST00000398809 MAGED2Q9UNF1 606 aaPredicted RBP18.49■□□□□ 0.55
CDH23-205ENST00000398809 NPHP3-ACAD11A0A0J9YXS1 232 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 IPO5O00410 1097 aaKnown RBP18.49■□□□□ 0.55
CDH23-205ENST00000398809 RASGRP2Q7LDG7 609 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 KCTD6Q8NC69 237 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 SH2D3AQ9BRG2 576 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 C11orf70Q9BRQ4 267 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 CAMTA2O94983 1202 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 KCNB2Q92953 911 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 MLXIPLQ9NP71 852 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 SMYD2Q9NRG4 433 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 MTMR4Q9NYA4 1195 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 NEXMIFQ5QGS0 1516 aa18.49■□□□□ 0.55
CDH23-205ENST00000398809 GYPCP04921 128 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 ADCY2Q08462 1091 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 ITKQ08881 620 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 SNX12Q9UMY4 172 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 C1orf167Q5SNV9 1468 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 LRRIQ1Q96JM4 1722 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 MMEP08473 750 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 SRGNP10124 158 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 Q3C1V9 767 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 CIAPIN1Q6FI81 312 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 DPP9Q86TI2 863 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 ERICH1Q86X53 443 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 PDIK1LQ8N165 341 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 FAM213AQ9BRX8 229 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 DDX23Q9BUQ8 820 aaKnown RBP18.48■□□□□ 0.55
CDH23-205ENST00000398809 SYNGAP1Q96PV0 1343 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 RHOBTB3O94955 611 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 NMT1P30419 496 aaKnown RBP18.48■□□□□ 0.55
CDH23-205ENST00000398809 TTLL6Q8N841 843 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 EIF2AK1Q9BQI3 630 aaKnown RBP18.48■□□□□ 0.55
CDH23-205ENST00000398809 ZWILCHQ9H900 591 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 NGRNQ9NPE2 291 aaKnown RBP18.48■□□□□ 0.55
CDH23-205ENST00000398809 DENND3A2RUS2 1198 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 CPP00450 1065 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 TBC1D1Q86TI0 1168 aaPredicted RBP18.48■□□□□ 0.55
CDH23-205ENST00000398809 SAAL1Q96ER3 474 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 AMACRQ9UHK6 382 aa18.48■□□□□ 0.55
CDH23-205ENST00000398809 MYMKA6NI61 221 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 WDR64B1ANS9 1081 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 SUPT20HL1Q3ZLR7 823 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 SH3BP5O60239 455 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 ECE2O60344 883 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 USP11P51784 963 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 VAMP7P51809 220 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 PDIA5Q14554 519 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 SBK1Q52WX2 424 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 FAM47EQ6ZV65 393 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 PYROXD1Q8WU10 500 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 LXNQ9BS40 222 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 REREQ9P2R6 1566 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 GCKP35557 465 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 CDO1Q16878 200 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 ZNF449Q6P9G9 518 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 TMEM270Q6UE05 265 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 RNF25Q96BH1 459 aaPredicted RBP18.47■□□□□ 0.55
CDH23-205ENST00000398809 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.47■□□□□ 0.55
CDH23-205ENST00000398809 TTC7AQ9ULT0 858 aaPredicted RBP18.47■□□□□ 0.55
CDH23-205ENST00000398809 DAGLAQ9Y4D2 1042 aa18.47■□□□□ 0.55
CDH23-205ENST00000398809 QARSP47897 775 aaKnown RBP18.46■□□□□ 0.55
CDH23-205ENST00000398809 TROAPQ12815 778 aa18.46■□□□□ 0.55
CDH23-205ENST00000398809 ANKRD7Q92527 254 aa18.46■□□□□ 0.55
CDH23-205ENST00000398809 EDEM3Q9BZQ6 932 aa18.46■□□□□ 0.55
CDH23-205ENST00000398809 SART1O43290 800 aaKnown RBP18.46■□□□□ 0.55
CDH23-205ENST00000398809 AP5Z1O43299 807 aa18.46■□□□□ 0.55
CDH23-205ENST00000398809 PTPAQ15257 358 aa18.46■□□□□ 0.55
CDH23-205ENST00000398809 DNAAF3Q8N9W5 541 aa18.46■□□□□ 0.55
CDH23-205ENST00000398809 MS4A14Q96JA4 679 aa18.46■□□□□ 0.55
CDH23-205ENST00000398809 INTS2Q9H0H0 1204 aaKnown RBP18.46■□□□□ 0.55
CDH23-205ENST00000398809 TAF1DQ9H5J8 278 aaPredicted RBP18.46■□□□□ 0.55
CDH23-205ENST00000398809 SAYSD1Q9NPB0 183 aa18.46■□□□□ 0.55
CDH23-205ENST00000398809 GINM1Q9NU53 330 aa18.46■□□□□ 0.55
CDH23-205ENST00000398809 SLC5A4Q9NY91 659 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms