RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ERLIN1O75477 346 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 GCNT3O95395 438 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 ARID5AQ03989 594 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 RUBCNQ92622 972 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 NOX5Q96PH1 765 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 WNT10BO00744 389 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 CHMP2AO43633 222 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 MUTP22033 750 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 GUCY2CP25092 1073 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 DLG4P78352 724 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 FOXR1Q6PIV2 292 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 TPH2Q8IWU9 490 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 FAM71BQ8TC56 605 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 WNK4Q96J92 1243 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 DEF6Q9H4E7 631 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 VPS18Q9P253 973 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 OTOFQ9HC10 1997 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 F8VZ95 297 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 KLHL30Q0D2K2 578 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 ASIC2Q16515 512 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 UGCGQ16739 394 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 EXOC3L4Q17RC7 722 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 MUM1L1Q5H9M0 696 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 MXRA8Q9BRK3 442 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 ZHX3Q9H4I2 956 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 TELO2Q9Y4R8 837 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 GCOM1H8Y6P7 765 aaPredicted RBP16.85■□□□□ 0.29
CPSF7-202ENST00000394888 RPS6KA5O75582 802 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 POLR2MP0CAP2 368 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 ZYXQ15942 572 aaKnown RBP16.85■□□□□ 0.29
CPSF7-202ENST00000394888 TDRD12Q587J7 1177 aaKnown RBP16.85■□□□□ 0.29
CPSF7-202ENST00000394888 DCAF12L1Q5VU92 463 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 FAM83AQ86UY5 434 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 ARHGEF10LQ9HCE6 1279 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 GOPCQ9HD26 462 aa16.85■□□□□ 0.29
CPSF7-202ENST00000394888 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-202ENST00000394888 KIAA0753Q2KHM9 967 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 CAVIN3Q969G5 261 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 LXNQ9BS40 222 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 GCNT4Q9P109 453 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 STK24Q9Y6E0 443 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 CALUO43852 315 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-202ENST00000394888 BCRP11274 1271 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 XRCC5P13010 732 aaKnown RBP16.84■□□□□ 0.29
CPSF7-202ENST00000394888 GAP43P17677 238 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 PHLDB3Q6NSJ2 640 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 SCFD2Q8WU76 684 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 UBIAD1Q9Y5Z9 338 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 ASTN2O75129 1339 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-202ENST00000394888 TMEM150BA6NC51 233 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 RNF40O75150 1001 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 ICAM1P05362 532 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 IKQ13123 557 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-202ENST00000394888 SLC9A9Q8IVB4 645 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 UBE4BO95155 1302 aa16.84■□□□□ 0.29
CPSF7-202ENST00000394888 HMGB2P26583 209 aaKnown RBP16.83■□□□□ 0.29
CPSF7-202ENST00000394888 TPCN2Q8NHX9 752 aa16.83■□□□□ 0.29
CPSF7-202ENST00000394888 TRIM34Q9BYJ4 488 aa16.83■□□□□ 0.29
CPSF7-202ENST00000394888 STIM2Q9P246 746 aa16.83■□□□□ 0.29
CPSF7-202ENST00000394888 CES2O00748 559 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 SHOX2O60902 331 aaPredicted RBP16.83■□□□□ 0.28
CPSF7-202ENST00000394888 IPO7O95373 1038 aaKnown RBP16.83■□□□□ 0.28
CPSF7-202ENST00000394888 KRT18P05783 430 aaKnown RBP16.83■□□□□ 0.28
CPSF7-202ENST00000394888 DPEP1P16444 411 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 FMO5P49326 533 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 SUPT20HQ8NEM7 779 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 GBP3Q9H0R5 595 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 IPO5O00410 1097 aaKnown RBP16.83■□□□□ 0.28
CPSF7-202ENST00000394888 TTMPQ5BVD1 217 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 DCAF17Q5H9S7 520 aaPredicted RBP16.83■□□□□ 0.28
CPSF7-202ENST00000394888 ZNF772Q68DY9 489 aaPredicted RBP16.83■□□□□ 0.28
CPSF7-202ENST00000394888 ZNF577Q9BSK1 485 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 PARVGQ9HBI0 331 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 TAS2R14Q9NYV8 317 aa16.83■□□□□ 0.28
CPSF7-202ENST00000394888 STBD1O95210 358 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 CARSP49589 748 aaKnown RBP16.82■□□□□ 0.28
CPSF7-202ENST00000394888 PPATQ06203 517 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 USP38Q8NB14 1042 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 MKNK1Q9BUB5 465 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 MED4Q9NPJ6 270 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 FEM1BQ9UK73 627 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 ODF2LQ9ULJ1 636 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 NCANO14594 1321 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 TULP2O00295 520 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 HIP1RO75146 1068 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 POU5F1Q01860 360 aaKnown RBP16.82■□□□□ 0.28
CPSF7-202ENST00000394888 CASKIN2Q8WXE0 1202 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 ALS2CR12Q96Q35 445 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 TMX4Q9H1E5 349 aaPredicted RBP16.82■□□□□ 0.28
CPSF7-202ENST00000394888 AGO4Q9HCK5 861 aaKnown RBP16.82■□□□□ 0.28
CPSF7-202ENST00000394888 COG5Q9UP83 839 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 EVI5O60447 810 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 TRIM49P0CI25 452 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 TRIM49CP0CI26 452 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 CXCL9Q07325 125 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 RASGEF1CQ8N431 466 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 FAM204AQ9H8W3 233 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 PCDHB13Q9Y5F0 798 aa16.82■□□□□ 0.28
CPSF7-202ENST00000394888 SSC5DA1L4H1 1573 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms